RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TIMM17BO60830 172 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 ZNF525Q8N782 197 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TCRBV4S1A1TA0A5B7 111 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 M0QZQ0 153 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TMUB1Q9BVT8 246 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 PRDM6Q9NQX0 595 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 C5P01031 1676 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 CCL11P51671 97 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 Q6ZSR3 168 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 DOCK3Q8IZD9 2030 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 LOC102723996A0A087X1L8 192 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TMEM256-PLSCR3K7ERE1 68 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TNFRSF4P43489 277 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TRBV19A0A075B6N1 114 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 H0YGG7 62 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 PRR13Q9NZ81 148 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TRGV8A0A0C4DH27 118 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 HAX1O00165 279 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 IGLV3-27P01718 113 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 ZC2HC1BQ5TFG8 222 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TRAV17A0A0B4J275 112 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 LILRA5A6NI73 299 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TNFRSF13BO14836 293 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-202ENST00000344113 RASL10AQ92737 203 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 JPT2Q9H910 190 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 WDR83OSQ9Y284 106 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TINCRA0A1B0GVN0 87 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 PPP1R32Q7Z5V6 425 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 CHKB-CPT1BH3BT56 60 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 THADAQ6YHU6 1953 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 FOLR3P41439 243 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 SBSPONQ8IVN8 264 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 IDI2-AS1Q9NZ38 188 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 TDRD15B5MCY1 1934 aaKnown RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 DENND4AQ7Z401 1863 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 CFC1BP0CG36 223 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 CFC1P0CG37 223 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 LOXL1Q08397 574 aaPredicted RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 FXYD3Q14802 87 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 RPP25LQ8N5L8 163 aaKnown RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 LINC00271P0C7V0 271 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 QRFPP83859 136 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 NBL1P41271 181 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 MRPL51Q4U2R6 128 aaKnown RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 KIAA1551Q9HCM1 1747 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 NNATQ16517 81 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 ZNF474Q6S9Z5 364 aaPredicted RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 KIR2DL5BQ8NHK3 375 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 Q96M66 194 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 A0A1W2PR77 199 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 CD164Q04900 197 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 ACANP16112 2415 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 LYPD6Q86Y78 171 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 SCARF2Q96GP6 870 aaPredicted RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 DDTLA6NHG4 134 aaPredicted RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 LINC01590Q5TEZ4 76 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 CALYQ9NYX4 217 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 DKK4Q9UBT3 224 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 PDCD11Q14690 1871 aaKnown RBP3.07□□□□□ -1.92
SYNE2-202ENST00000344113 PRR32B1ATL7 298 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 IGLL5B9A064 214 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 C18orf15Q96N68 181 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 TRAV8-3A0A0A6YYJ7 113 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 NPPCP23582 126 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 FMN2Q9NZ56 1722 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 IGHV3OR15-7A0A075B7D8 119 aa3.07□□□□□ -1.92
SYNE2-202ENST00000344113 MRPL14Q6P1L8 145 aaKnown RBP3.06□□□□□ -1.92
SYNE2-202ENST00000344113 RICTORQ6R327 1708 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 DDX60LQ5H9U9 1706 aaKnown RBP3.06□□□□□ -1.92
SYNE2-202ENST00000344113 STATHP02808 62 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 CFAP126Q5VTH2 177 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 ZPLD1Q8TCW7 415 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 SPTSSBQ8NFR3 76 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 KDM3BQ7LBC6 1761 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 TET2Q6N021 2002 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-202ENST00000344113 NAV1Q8NEY1 1877 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 IGKV1D-42A0A075B6H8 117 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 CASC2Q6XLA1 102 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 SAA1P0DJI8 122 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-202ENST00000344113 LINC00467Q9BRT7 94 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 PTPN13Q12923 2485 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 BLCAPP62952 87 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 SPACA3Q8IXA5 215 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 B9A039 149 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 C1orf53Q5VUE5 145 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 CACNA1SQ13698 1873 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 LGALS9O00182 355 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 Q8N8P6 123 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 RNF5Q99942 180 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 WFDC2Q14508 124 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 C1QTNF5Q9BXJ0 243 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 TRAV12-1A0A0B4J245 112 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 CLLU1OSQ5K130 101 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 RSPO2Q6UXX9 243 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-202ENST00000344113 LIMD2Q9BT23 127 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 FER1L6Q2WGJ9 1857 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 RHOHQ15669 191 aa3.06□□□□□ -1.92
SYNE2-202ENST00000344113 QSER1Q2KHR3 1735 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms