RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SH2D7A6NKC9 451 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 Q8N6K4 173 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 TPPP3Q9BW30 176 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 SIRPDQ9H106 197 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 USP9XQ93008 2570 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 IGHV7-81A0A0B4J1V7 117 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 C19orf84I3L1E1 186 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 MRPS12O15235 138 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 SSTP61278 116 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 PMCHL1Q16048 86 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 ECSCRQ19T08 205 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 CT83Q5H943 113 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 PSG8Q9UQ74 426 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 M0R2Z0 102 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 MINOS1Q5TGZ0 78 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 LCN12Q6JVE5 192 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 C1orf122Q6ZSJ8 110 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 MINOS1-NBL1R4GNA1 71 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 MYO18BQ8IUG5 2567 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 TRAV30A0A087WSZ9 112 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 ZNF785A8K8V0 405 aa11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-202ENST00000343765 IGHV2-70DA0A0C4DH43 119 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 K7EQM0 130 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 CHEK1O14757 476 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 Q8N9W7 124 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 THYN1Q9P016 225 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 POLQO75417 2590 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 NPIPB6E9PJ23 425 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 GNLYP22749 145 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 SAA4P35542 130 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 KLF5Q13887 457 aaPredicted RBP11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 PSG3Q16557 428 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 TMEM75Q8N9X5 138 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 RNF24Q9Y225 148 aa11.65□□□□□ -0.54
VIPAS39-202ENST00000343765 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
VIPAS39-202ENST00000343765 EFNA4P52798 201 aa11.64□□□□□ -0.55
VIPAS39-202ENST00000343765 C20orf144Q9BQM9 153 aa11.64□□□□□ -0.55
VIPAS39-202ENST00000343765 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
VIPAS39-202ENST00000343765 OOSP1A8MZH6 123 aa11.64□□□□□ -0.55
VIPAS39-202ENST00000343765 ITLN2Q8WWU7 325 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-202ENST00000343765 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
VIPAS39-202ENST00000343765 IGHV3OR16-10A0A075B7F0 116 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 IGKV2-40A0A087WW87 121 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 TMSB15BA0A087X1C1 80 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 IGKV2D-40P01614 121 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 CLEC5AQ9NY25 188 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 FAM181BA6NEQ2 426 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 M0R143 59 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 CTSGP08311 255 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 ARMS2P0C7Q2 107 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 GPR183P32249 361 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 CRIP1P50238 77 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 EBI3Q14213 229 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 UNQ5815/PRO19632Q6UWF5 114 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 URB1-AS1Q96HZ7 61 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 MIEN1Q9BRT3 115 aa11.63□□□□□ -0.55
VIPAS39-202ENST00000343765 LBHQ53QV2 105 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 LYPD1Q8N2G4 141 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 OR4B1Q8NGF8 309 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 C1RLQ9NZP8 487 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 ZFP30Q9Y2G7 519 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 SOX21Q9Y651 276 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 ATP6V0E1O15342 81 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 UBE2E1P51965 193 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 ZNF138P52744 262 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 BATFQ16520 125 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 MAJINQ3KP22 176 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 AJUBAQ96IF1 538 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 CSN1S1P47710 185 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 LMO4P61968 165 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 S100A7AQ86SG5 101 aa11.62□□□□□ -0.55
VIPAS39-202ENST00000343765 LINC01548A6NM66 108 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 G3V318 75 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 ZNF48Q96MX3 618 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 LOC102724200A0A096LPH7 203 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 IGHV3-66A0A0C4DH42 116 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 APOHP02749 345 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 CSN3P07498 182 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 CT45A10P0DMU9 189 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 RAB4AP20338 218 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 Q8TAT8 98 aa11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 TIMM8BQ9Y5J9 83 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-202ENST00000343765 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
VIPAS39-202ENST00000343765 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
VIPAS39-202ENST00000343765 A0A1B0GUT8 65 aa11.6□□□□□ -0.55
VIPAS39-202ENST00000343765 RHOGP84095 191 aa11.6□□□□□ -0.55
VIPAS39-202ENST00000343765 MUC21Q5SSG8 566 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms