RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 NEU4Q8WWR8 484 aaPredicted RBP13.13□□□□□ -0.31
RDX-201ENST00000343115 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 P0C879 139 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 NBL1P41271 181 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 C5orf64Q2M2E5 130 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 IGFL2Q6UWQ7 119 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 GTF2H5Q6ZYL4 71 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 TMEM160Q9NX00 188 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
RDX-201ENST00000343115 LYZL1Q6UWQ5 148 aa13.12□□□□□ -0.31
RDX-201ENST00000343115 PDLIM4P50479 330 aa13.12□□□□□ -0.31
RDX-201ENST00000343115 RPS20P60866 119 aaKnown RBP13.12□□□□□ -0.31
RDX-201ENST00000343115 CACNG7P62955 275 aa13.12□□□□□ -0.31
RDX-201ENST00000343115 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
RDX-201ENST00000343115 EEF1AKMT3Q96AZ1 226 aa13.12□□□□□ -0.31
RDX-201ENST00000343115 D6R8Y8 96 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 SMKR1H3BMG3 65 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 DEFB104AQ8WTQ1 72 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 NCKAP5O14513 1909 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 SRSF9Q13242 221 aaKnown RBP eCLIP13.11□□□□□ -0.31
RDX-201ENST00000343115 FXYD5Q96DB9 178 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 MRPL36Q9P0J6 103 aaKnown RBP13.11□□□□□ -0.31
RDX-201ENST00000343115 TDGF1P3P51864 188 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 NCOR1P1Q9H4R4 102 aa13.11□□□□□ -0.31
RDX-201ENST00000343115 COA6Q5JTJ3 125 aaKnown RBP13.1□□□□□ -0.31
RDX-201ENST00000343115 NAA38Q9BRA0 125 aaKnown RBP13.1□□□□□ -0.31
RDX-201ENST00000343115 FABP5P3A8MUU1 101 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 TOMM40O96008 361 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 C17orf77Q96MU5 243 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 TMEM208Q9BTX3 173 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 USP9XQ93008 2570 aaPredicted RBP13.1□□□□□ -0.31
RDX-201ENST00000343115 SONP18583 2426 aaKnown RBP13.1□□□□□ -0.31
RDX-201ENST00000343115 MAJINQ3KP22 176 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 FBLN7Q53RD9 439 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 Q86TA4 180 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 REV3LO60673 3130 aa13.1□□□□□ -0.31
RDX-201ENST00000343115 DNLZQ5SXM8 178 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 FAM71F2Q6NXP2 309 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 AMN1Q8IY45 258 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 ATG2AQ2TAZ0 1938 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 NDPQ00604 133 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 MPV17L2Q567V2 206 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 CELSR3Q9NYQ7 3312 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 DLEU1O43261 78 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 PATE2Q6UY27 113 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 FOXC2Q99958 501 aa13.09□□□□□ -0.31
RDX-201ENST00000343115 SCGB1C2P0DMR2 95 aa13.08□□□□□ -0.32
RDX-201ENST00000343115 SRD5A1P18405 259 aa13.08□□□□□ -0.32
RDX-201ENST00000343115 BRD3OSQ6XYD6 125 aa13.08□□□□□ -0.32
RDX-201ENST00000343115 IGLC7A0M8Q6 106 aa13.08□□□□□ -0.32
RDX-201ENST00000343115 A1L4Q6 167 aa13.08□□□□□ -0.32
RDX-201ENST00000343115 TMEM249Q2WGJ8 235 aa13.08□□□□□ -0.32
RDX-201ENST00000343115 PCP4P48539 62 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 Q6AWC8 147 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 TMEM213A2RRL7 107 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 Q1RN00 199 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
RDX-201ENST00000343115 A0A087X0K7 114 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 NDUFS7O75251 213 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 TSPOP30536 169 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 C20orf144Q9BQM9 153 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 MRPL27Q9P0M9 148 aaKnown RBP13.07□□□□□ -0.32
RDX-201ENST00000343115 EXPH5Q8NEV8 1989 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 SYS1-DBNDD2H3BUS1 97 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 YPEL4Q96NS1 127 aa13.07□□□□□ -0.32
RDX-201ENST00000343115 LEPP41159 167 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 DPF1Q92782 380 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 ALKBH7Q9BT30 221 aaPredicted RBP13.06□□□□□ -0.32
RDX-201ENST00000343115 RAB9AP51151 201 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 ABCA2Q9BZC7 2435 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 SMIM27A0A1W2PRY6 76 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 NDUFB8O95169 186 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 C8orf49Q96NF6 230 aa13.06□□□□□ -0.32
RDX-201ENST00000343115 C22orf46C9J442 243 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 SH2D1AO60880 128 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 PSG3Q16557 428 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 CHCHD1Q96BP2 118 aaKnown RBP13.05□□□□□ -0.32
RDX-201ENST00000343115 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 RASL11AQ6T310 242 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 IFI27P40305 119 aaPredicted RBP13.05□□□□□ -0.32
RDX-201ENST00000343115 NAV2Q8IVL1 2488 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 TRAV40A0A0B4J280 105 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 K7ERU9 68 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 ERCC8Q13216 396 aa13.05□□□□□ -0.32
RDX-201ENST00000343115 C3orf36Q3SXR2 165 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 MSRB2Q9Y3D2 182 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 HBDP02042 147 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 IGLC2P0DOY2 106 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 PET117Q6UWS5 81 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 Q6ZVH6 145 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 LINC00311Q8N616 119 aa13.04□□□□□ -0.32
RDX-201ENST00000343115 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms