RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 COA6Q5JTJ3 125 aaKnown RBP5.78□□□□□ -1.48
VCAN-202ENST00000342785 TMEM170BQ5T4T1 132 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 CDPF1Q6NVV7 123 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 SNHG12Q9BXW3 62 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 H3BUT2 72 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 ARMS2P0C7Q2 107 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 SPRNQ5BIV9 151 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 Q6ZWC4 215 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 TMEM219Q86XT9 240 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 TMEM190Q8WZ59 177 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 MCRIP2Q9BUT9 160 aaKnown RBP5.78□□□□□ -1.48
VCAN-202ENST00000342785 C11orf1Q9H5F2 150 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 SYS1-DBNDD2H3BUS1 97 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 H7C2G1 150 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 M0R1W7 72 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 PAX8Q06710 450 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 PSG3Q16557 428 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 MPV17L2Q567V2 206 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 ANKRD11Q6UB99 2663 aaPredicted RBP5.78□□□□□ -1.48
VCAN-202ENST00000342785 IGHV3OR16-12A0A075B7B8 117 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 TRAV40A0A0B4J280 105 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 hDV102S1A0JD36 115 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 FAM231DQ6ZW35 169 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 TRAV41A0A0B4J266 112 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 F2Z2F3 143 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 H3BVH4 76 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 IGFL2Q6UWQ7 119 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 EVI2AP22794 236 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 FXYD7P58549 80 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 SLAQ13239 276 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 PAPPA-AS1Q5QFB9 102 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 K7EM74 188 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 RNASE4P34096 147 aaKnown RBP5.77□□□□□ -1.49
VCAN-202ENST00000342785 AMN1Q8IY45 258 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 TRAV21A0A0B4J279 112 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 C5orf30Q96GV9 206 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 MS4A6AQ9H2W1 248 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 SPCS1Q9Y6A9 102 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 FAM231BA6NCW3 169 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 SH2D1AO60880 128 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 IGLV2-14P01704 120 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
VCAN-202ENST00000342785 TDGF1P3P51864 188 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 RAX2Q96IS3 184 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 SLC25A2Q9BXI2 301 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 KAAG1Q9UBP8 84 aa5.77□□□□□ -1.49
VCAN-202ENST00000342785 HIVEP2P31629 2446 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 TRBV19A0A075B6N1 114 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 PROP1O75360 226 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 NPFFR1Q9GZQ6 430 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 ZNF492Q9P255 531 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 ZNF106Q9H2Y7 1883 aaKnown RBP5.76□□□□□ -1.49
VCAN-202ENST00000342785 ASPHD1Q5U4P2 390 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 BRD3OSQ6XYD6 125 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 SMIM12Q96EX1 92 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 SRSF8Q9BRL6 282 aaKnown RBP5.76□□□□□ -1.49
VCAN-202ENST00000342785 ALKBH7Q9BT30 221 aaPredicted RBP5.76□□□□□ -1.49
VCAN-202ENST00000342785 CTSZQ9UBR2 303 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 K7EN84 100 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 NDUFB8O95169 186 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 IGLC1P0CG04 106 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 PDE6HQ13956 83 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 MSMPQ1L6U9 139 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 CT83Q5H943 113 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 ZNF256Q9Y2P7 627 aaPredicted RBP5.76□□□□□ -1.49
VCAN-202ENST00000342785 K7ENP7 123 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 OR4X2Q8NGF9 303 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 LTBP2Q14767 1821 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 C2orf16Q68DN1 1984 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 LHBP01229 141 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 ARL6IP6Q8N6S5 226 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 ORAOV1Q8WV07 137 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 NHP2Q9NX24 153 aaKnown RBP5.76□□□□□ -1.49
VCAN-202ENST00000342785 DPM2O94777 84 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 NDUFA3O95167 84 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 NDPQ00604 133 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 MOB4Q9Y3A3 225 aa5.76□□□□□ -1.49
VCAN-202ENST00000342785 IGLC2P0DOY2 106 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 IGLC3P0DOY3 106 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 SRSF1Q07955 248 aaKnown RBP eCLIP5.75□□□□□ -1.49
VCAN-202ENST00000342785 FXYD5Q96DB9 178 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 DUX5Q96PT3 197 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 GFRA4Q9GZZ7 299 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 CD7P09564 240 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 GUSBP1Q15486 140 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 ODF3L1Q8IXM7 274 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 OR2K2Q8NGT1 345 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 BPESC1Q9GZL8 116 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 SELENOKQ9Y6D0 94 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 MED12LQ86YW9 2145 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 PAX1P15863 534 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 SAA4P35542 130 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 SIGLEC15Q6ZMC9 328 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 JKAMPQ9P055 326 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 IGLC7A0M8Q6 106 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 CHD8Q9HCK8 2581 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 SMKR1H3BMG3 65 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 H3BUX3 64 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 COX6CP09669 75 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 C9orf139Q6ZV77 190 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms