RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 NCOA6Q14686 2063 aaPredicted RBP11.95□□□□□ -0.5
RRP1B-201ENST00000340648 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 IGHV3OR16-12A0A075B7B8 117 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 MBD3L4A6NDZ8 208 aaPredicted RBP11.95□□□□□ -0.5
RRP1B-201ENST00000340648 MBD3L3A6NE82 208 aaPredicted RBP11.95□□□□□ -0.5
RRP1B-201ENST00000340648 MBD3L5A6NJ08 208 aaPredicted RBP11.95□□□□□ -0.5
RRP1B-201ENST00000340648 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 MBD3L2Q8NHZ7 208 aaPredicted RBP11.95□□□□□ -0.5
RRP1B-201ENST00000340648 BUB1B-PAK6H3BSN5 160 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 PRSS57Q6UWY2 283 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 Q6ZPA2 131 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 SHANK2-AS3Q9BTD1 123 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 TPSG1Q9NRR2 321 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 ARHGAP21Q5T5U3 1957 aa11.95□□□□□ -0.5
RRP1B-201ENST00000340648 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 CRIP3Q6Q6R5 217 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 LYPD1Q8N2G4 141 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 FXYD5Q96DB9 178 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 TRAV8-2A0A0B4J237 113 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 IGLV2-14P01704 120 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 C15orf32Q32M92 178 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 C11orf53Q8IXP5 236 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 CYSLTR1Q9Y271 337 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 OBSL1O75147 1896 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 CCL25O15444 150 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 FRMD6-AS1P0C7T7 363 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 BVES-AS1Q5T3Y7 98 aa11.94□□□□□ -0.5
RRP1B-201ENST00000340648 CLEC2AQ6UVW9 174 aa11.93□□□□□ -0.5
RRP1B-201ENST00000340648 ZNF833PQ6ZTB9 187 aa11.93□□□□□ -0.5
RRP1B-201ENST00000340648 SNRPD3P62318 126 aaKnown RBP11.93□□□□□ -0.5
RRP1B-201ENST00000340648 PAX2Q02962 417 aa11.93□□□□□ -0.5
RRP1B-201ENST00000340648 RIF1Q5UIP0 2472 aaKnown RBP11.93□□□□□ -0.5
RRP1B-201ENST00000340648 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
RRP1B-201ENST00000340648 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
RRP1B-201ENST00000340648 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
RRP1B-201ENST00000340648 CIRBPQ14011 172 aaKnown RBP11.93□□□□□ -0.5
RRP1B-201ENST00000340648 COX8AP10176 69 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 IGLC7A0M8Q6 106 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 DIAPH2-AS1Q14236 149 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 ZNF672Q499Z4 452 aaPredicted RBP11.92□□□□□ -0.5
RRP1B-201ENST00000340648 ADAMTSL5Q6ZMM2 481 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 NUP37Q8NFH4 326 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 CD7P09564 240 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 C19orf54Q5BKX5 351 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 NEU4Q8WWR8 484 aaPredicted RBP11.92□□□□□ -0.5
RRP1B-201ENST00000340648 DDB2Q92466 427 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 PSMB11A5LHX3 300 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 FAM104BQ5XKR9 115 aa11.92□□□□□ -0.5
RRP1B-201ENST00000340648 H3BRM9 83 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 TMEM75Q8N9X5 138 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 WFDC12Q8WWY7 111 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 NBASA2RRP1 2371 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 HAX1O00165 279 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 ERCC8Q13216 396 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 C5orf64Q2M2E5 130 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 MRAP2Q96G30 205 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 C9orf118A6NHY6 69 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 ACACAQ13085 2346 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
RRP1B-201ENST00000340648 TRBV19A0A075B6N1 114 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 TRAV2A0A0B4J234 112 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 IGHV4-39P01824 125 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
RRP1B-201ENST00000340648 TRAV40A0A0B4J280 105 aa11.9□□□□□ -0.5
RRP1B-201ENST00000340648 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
RRP1B-201ENST00000340648 PAX1P15863 534 aa11.9□□□□□ -0.5
RRP1B-201ENST00000340648 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
RRP1B-201ENST00000340648 RNF5Q99942 180 aa11.9□□□□□ -0.5
RRP1B-201ENST00000340648 PCNX3Q9H6A9 2034 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 A0A0G2JNJ9 132 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 A8MWV9 139 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 GATA4P43694 442 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 NDPQ00604 133 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 SIGLEC15Q6ZMC9 328 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 ZC2HC1AQ96GY0 325 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 SPOCK3Q9BQ16 436 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 Q9UFV3 132 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 TNFRSF18Q9Y5U5 241 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 PLNP26678 52 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 WIPF2Q8TF74 440 aaPredicted RBP11.89□□□□□ -0.51
RRP1B-201ENST00000340648 K7EP13 123 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 NPFFO15130 113 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 CEACAM8P31997 349 aaPredicted RBP11.89□□□□□ -0.51
RRP1B-201ENST00000340648 SUMO2P61956 95 aaKnown RBP11.89□□□□□ -0.51
RRP1B-201ENST00000340648 SIGLEC8Q9NYZ4 499 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 TSPAN13O95857 204 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 POU2AF1Q16633 256 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 MRPL51Q4U2R6 128 aaKnown RBP11.89□□□□□ -0.51
RRP1B-201ENST00000340648 MORN5Q5VZ52 161 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
RRP1B-201ENST00000340648 SRD5A1P18405 259 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
RRP1B-201ENST00000340648 DUX5Q96PT3 197 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 NCOR1P1Q9H4R4 102 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 TMEM8BA6NDV4 472 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms