RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 PARD6GQ9BYG4 376 aaPredicted RBP12.92□□□□□ -0.34
IFT27-201ENST00000340630 KRTAP4-5Q9BYR2 181 aa12.92□□□□□ -0.34
IFT27-201ENST00000340630 TEX46H3BTG2 121 aa12.91□□□□□ -0.34
IFT27-201ENST00000340630 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
IFT27-201ENST00000340630 SLC38A11Q08AI6 406 aa12.91□□□□□ -0.34
IFT27-201ENST00000340630 FNDC4Q9H6D8 234 aaPredicted RBP12.91□□□□□ -0.34
IFT27-201ENST00000340630 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
IFT27-201ENST00000340630 HSPG2P98160 4391 aa12.91□□□□□ -0.34
IFT27-201ENST00000340630 HELTA6NFD8 242 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 CORTO00230 105 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 IFNA5P01569 189 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.34
IFT27-201ENST00000340630 OPRK1P41145 380 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 BLOC1S1P78537 153 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 ATP6V1FQ16864 119 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 TIGITQ495A1 244 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 TOR2AQ5JU69 321 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 PXDC1Q5TGL8 231 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 ZNF575Q86XF7 245 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 UBE2DNLQ8IWF7 75 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 GNPNAT1Q96EK6 184 aaPredicted RBP12.9□□□□□ -0.34
IFT27-201ENST00000340630 RFNGQ9Y644 331 aa12.9□□□□□ -0.34
IFT27-201ENST00000340630 INS-IGF2F8WCM5 200 aa12.89□□□□□ -0.35
IFT27-201ENST00000340630 SCGB2A1O75556 95 aa12.89□□□□□ -0.35
IFT27-201ENST00000340630 RAB5CP51148 216 aa12.89□□□□□ -0.35
IFT27-201ENST00000340630 NUTF2P61970 127 aaKnown RBP12.89□□□□□ -0.35
IFT27-201ENST00000340630 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
IFT27-201ENST00000340630 Q6ZRG5 221 aa12.89□□□□□ -0.35
IFT27-201ENST00000340630 OR2G3Q8NGZ4 309 aa12.89□□□□□ -0.35
IFT27-201ENST00000340630 C1QTNF4Q9BXJ3 329 aa12.89□□□□□ -0.35
IFT27-201ENST00000340630 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
IFT27-201ENST00000340630 EMP1P54849 157 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 RPP30P78346 268 aaKnown RBP12.88□□□□□ -0.35
IFT27-201ENST00000340630 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 OR8G2PQ6IF36 304 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 OR10P1Q8NGE3 313 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 LYPD6BQ8NI32 183 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
IFT27-201ENST00000340630 RAB19A4D1S5 217 aa12.87□□□□□ -0.35
IFT27-201ENST00000340630 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
IFT27-201ENST00000340630 C16orf54Q6UWD8 224 aa12.87□□□□□ -0.35
IFT27-201ENST00000340630 SCGB1C1Q8TD33 95 aa12.87□□□□□ -0.35
IFT27-201ENST00000340630 PSMG3Q9BT73 122 aaPredicted RBP12.87□□□□□ -0.35
IFT27-201ENST00000340630 WDR61Q9GZS3 305 aaKnown RBP12.87□□□□□ -0.35
IFT27-201ENST00000340630 HEYLQ9NQ87 328 aaPredicted RBP12.87□□□□□ -0.35
IFT27-201ENST00000340630 U3KQE9 123 aa12.87□□□□□ -0.35
IFT27-201ENST00000340630 TRAV30A0A087WSZ9 112 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 UBE2L5PA0A1B0GUS4 154 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 UMAD1C9J7I0 102 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 PRSS46E5RG02 174 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 H3BMM0 161 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 SNRPD3P62318 126 aaKnown RBP12.86□□□□□ -0.35
IFT27-201ENST00000340630 Q6ZR54 194 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 TMEM170AQ8WVE7 144 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 GLMPQ8WWB7 406 aa12.86□□□□□ -0.35
IFT27-201ENST00000340630 CAMLGP49069 296 aa12.85□□□□□ -0.35
IFT27-201ENST00000340630 SOHLH1Q5JUK2 328 aa12.85□□□□□ -0.35
IFT27-201ENST00000340630 Q8WTZ3 238 aa12.85□□□□□ -0.35
IFT27-201ENST00000340630 RSG1Q9BU20 258 aa12.85□□□□□ -0.35
IFT27-201ENST00000340630 UQCC1Q9NVA1 299 aa12.85□□□□□ -0.35
IFT27-201ENST00000340630 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
IFT27-201ENST00000340630 FHITP49789 147 aa12.84□□□□□ -0.35
IFT27-201ENST00000340630 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
IFT27-201ENST00000340630 SLC24A4Q8NFF2 622 aa12.84□□□□□ -0.35
IFT27-201ENST00000340630 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
IFT27-201ENST00000340630 TMEM189A5PLL7 270 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 IGKV3-20P01619 116 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 FXYD7P58549 80 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 RAB11AP62491 216 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 DLK1P80370 383 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 BSXQ3C1V8 233 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 AKR1C8PQ5T2L2 129 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 ZNF705AQ6ZN79 300 aaPredicted RBP12.83□□□□□ -0.36
IFT27-201ENST00000340630 FAM213BQ8TBF2 198 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 FAM210BQ96KR6 192 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 LINC00052Q96N35 136 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 NEU1Q99519 415 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 GGACTQ9BVM4 153 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 NRN1Q9NPD7 142 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 LRP1BQ9NZR2 4599 aa12.83□□□□□ -0.36
IFT27-201ENST00000340630 IGLC1P0CG04 106 aa12.82□□□□□ -0.36
IFT27-201ENST00000340630 HTN3P15516 51 aa12.82□□□□□ -0.36
IFT27-201ENST00000340630 FGF7P21781 194 aa12.82□□□□□ -0.36
IFT27-201ENST00000340630 OR10J1P30954 320 aa12.82□□□□□ -0.36
IFT27-201ENST00000340630 USF2Q15853 346 aaPredicted RBP12.82□□□□□ -0.36
IFT27-201ENST00000340630 C1orf134Q5TEV5 83 aa12.82□□□□□ -0.36
IFT27-201ENST00000340630 SEPSECSQ9HD40 501 aaKnown RBP12.82□□□□□ -0.36
IFT27-201ENST00000340630 WDR83OSQ9Y284 106 aa12.82□□□□□ -0.36
IFT27-201ENST00000340630 SMIM9A6NGZ8 99 aa12.81□□□□□ -0.36
IFT27-201ENST00000340630 ZNF705FA8MVS1 300 aaPredicted RBP12.81□□□□□ -0.36
IFT27-201ENST00000340630 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
IFT27-201ENST00000340630 IL4P05112 153 aa12.81□□□□□ -0.36
IFT27-201ENST00000340630 ZNF705DP0CH99 300 aaPredicted RBP12.81□□□□□ -0.36
IFT27-201ENST00000340630 ZNF705BP0CI00 300 aaPredicted RBP12.81□□□□□ -0.36
IFT27-201ENST00000340630 HLA-DRB4P13762 266 aa12.81□□□□□ -0.36
IFT27-201ENST00000340630 RND2P52198 227 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms