RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 NUP35Q8NFH5 326 aa11.77□□□□□ -0.52
RET-201ENST00000340058 CEP192Q8TEP8 1941 aa11.77□□□□□ -0.53
RET-201ENST00000340058 B4DSR2 109 aa11.77□□□□□ -0.53
RET-201ENST00000340058 ITGB1BP1O14713 200 aa11.77□□□□□ -0.53
RET-201ENST00000340058 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
RET-201ENST00000340058 PSMG4Q5JS54 123 aa11.77□□□□□ -0.53
RET-201ENST00000340058 COL5A1-AS1Q5SY13 56 aa11.77□□□□□ -0.53
RET-201ENST00000340058 CYB5R2Q6BCY4 276 aa11.77□□□□□ -0.53
RET-201ENST00000340058 PSMB11A5LHX3 300 aa11.77□□□□□ -0.53
RET-201ENST00000340058 MINOS1Q5TGZ0 78 aa11.77□□□□□ -0.53
RET-201ENST00000340058 ZNF562Q6V9R5 426 aa11.77□□□□□ -0.53
RET-201ENST00000340058 ORMDL3Q8N138 153 aa11.77□□□□□ -0.53
RET-201ENST00000340058 ZNF414Q96IQ9 312 aa11.77□□□□□ -0.53
RET-201ENST00000340058 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
RET-201ENST00000340058 MINOS1-NBL1R4GNA1 71 aa11.77□□□□□ -0.53
RET-201ENST00000340058 CHD3Q12873 2000 aaKnown RBP11.76□□□□□ -0.53
RET-201ENST00000340058 OVOL3O00110 214 aa11.76□□□□□ -0.53
RET-201ENST00000340058 PRSS2P07478 247 aa11.76□□□□□ -0.53
RET-201ENST00000340058 ASIPP42127 132 aa11.76□□□□□ -0.53
RET-201ENST00000340058 TMEM242Q9NWH2 141 aa11.76□□□□□ -0.53
RET-201ENST00000340058 SMKR1H3BMG3 65 aa11.76□□□□□ -0.53
RET-201ENST00000340058 LHBP01229 141 aa11.76□□□□□ -0.53
RET-201ENST00000340058 ZNF324O75467 553 aaPredicted RBP11.76□□□□□ -0.53
RET-201ENST00000340058 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
RET-201ENST00000340058 FAM120AOSQ5T036 256 aa11.76□□□□□ -0.53
RET-201ENST00000340058 PROP1O75360 226 aa11.75□□□□□ -0.53
RET-201ENST00000340058 FOXL1Q12952 345 aa11.75□□□□□ -0.53
RET-201ENST00000340058 NIT1Q86X76 327 aa11.75□□□□□ -0.53
RET-201ENST00000340058 PRSS22Q9GZN4 317 aa11.75□□□□□ -0.53
RET-201ENST00000340058 JKAMPQ9P055 326 aa11.75□□□□□ -0.53
RET-201ENST00000340058 A6NNC1 897 aa11.75□□□□□ -0.53
RET-201ENST00000340058 IGLV2-14P01704 120 aa11.75□□□□□ -0.53
RET-201ENST00000340058 OR4X2Q8NGF9 303 aa11.75□□□□□ -0.53
RET-201ENST00000340058 LYZL1Q6UWQ5 148 aa11.75□□□□□ -0.53
RET-201ENST00000340058 RAX2Q96IS3 184 aa11.75□□□□□ -0.53
RET-201ENST00000340058 PRDM13Q9H4Q3 707 aa11.75□□□□□ -0.53
RET-201ENST00000340058 FCN3O75636 299 aa11.75□□□□□ -0.53
RET-201ENST00000340058 FOXC2Q99958 501 aa11.75□□□□□ -0.53
RET-201ENST00000340058 SP5Q6BEB4 398 aaPredicted RBP11.74□□□□□ -0.53
RET-201ENST00000340058 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
RET-201ENST00000340058 BEND2Q8NDZ0 799 aa11.74□□□□□ -0.53
RET-201ENST00000340058 C17orf77Q96MU5 243 aa11.74□□□□□ -0.53
RET-201ENST00000340058 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
RET-201ENST00000340058 E7EUB6 86 aa11.74□□□□□ -0.53
RET-201ENST00000340058 MORN5Q5VZ52 161 aa11.74□□□□□ -0.53
RET-201ENST00000340058 PF4P02776 101 aa11.74□□□□□ -0.53
RET-201ENST00000340058 JOSD1Q15040 202 aaPredicted RBP11.74□□□□□ -0.53
RET-201ENST00000340058 LINC00614P0C842 121 aa11.73□□□□□ -0.53
RET-201ENST00000340058 PSMB2P49721 201 aa11.73□□□□□ -0.53
RET-201ENST00000340058 TNRC6AQ8NDV7 1962 aaKnown RBP11.73□□□□□ -0.53
RET-201ENST00000340058 RRN3P1Q2M238 152 aa11.73□□□□□ -0.53
RET-201ENST00000340058 DUX3Q96PT4 197 aa11.73□□□□□ -0.53
RET-201ENST00000340058 GNB1LQ9BYB4 327 aa11.73□□□□□ -0.53
RET-201ENST00000340058 DSCAMO60469 2012 aa11.73□□□□□ -0.53
RET-201ENST00000340058 ADORA2A-AS1P86434 159 aa11.73□□□□□ -0.53
RET-201ENST00000340058 LDLRAD2Q5SZI1 272 aa11.73□□□□□ -0.53
RET-201ENST00000340058 SYT8Q8NBV8 401 aa11.73□□□□□ -0.53
RET-201ENST00000340058 PARD6GQ9BYG4 376 aaPredicted RBP11.73□□□□□ -0.53
RET-201ENST00000340058 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
RET-201ENST00000340058 HERVK_113P61574 105 aa11.72□□□□□ -0.53
RET-201ENST00000340058 RNF5Q99942 180 aa11.72□□□□□ -0.53
RET-201ENST00000340058 TSPOP30536 169 aa11.72□□□□□ -0.53
RET-201ENST00000340058 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
RET-201ENST00000340058 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
RET-201ENST00000340058 CENPEQ02224 2701 aa11.72□□□□□ -0.53
RET-201ENST00000340058 D6R8Y8 96 aa11.72□□□□□ -0.53
RET-201ENST00000340058 MSMBP08118 114 aa11.72□□□□□ -0.53
RET-201ENST00000340058 C3orf36Q3SXR2 165 aa11.72□□□□□ -0.53
RET-201ENST00000340058 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
RET-201ENST00000340058 M0QZK8 103 aa11.71□□□□□ -0.53
RET-201ENST00000340058 ARMS2P0C7Q2 107 aa11.71□□□□□ -0.53
RET-201ENST00000340058 HLA-DMBP28068 263 aa11.71□□□□□ -0.53
RET-201ENST00000340058 Q71RC1 249 aaPredicted RBP11.71□□□□□ -0.53
RET-201ENST00000340058 AMN1Q8IY45 258 aa11.71□□□□□ -0.53
RET-201ENST00000340058 LINC01587Q99440 93 aa11.71□□□□□ -0.53
RET-201ENST00000340058 KIR2DL4Q99706 377 aa11.71□□□□□ -0.53
RET-201ENST00000340058 UBE2E1P51965 193 aa11.71□□□□□ -0.53
RET-201ENST00000340058 SYNJ2BPP57105 145 aa11.71□□□□□ -0.53
RET-201ENST00000340058 GTF2H5Q6ZYL4 71 aa11.71□□□□□ -0.53
RET-201ENST00000340058 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.54
RET-201ENST00000340058 LEPP41159 167 aa11.71□□□□□ -0.54
RET-201ENST00000340058 TDGF1P3P51864 188 aa11.71□□□□□ -0.54
RET-201ENST00000340058 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.54
RET-201ENST00000340058 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.54
RET-201ENST00000340058 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.54
RET-201ENST00000340058 OOSP1A8MZH6 123 aa11.71□□□□□ -0.54
RET-201ENST00000340058 SH2D1AO60880 128 aa11.71□□□□□ -0.54
RET-201ENST00000340058 CACNG7P62955 275 aa11.71□□□□□ -0.54
RET-201ENST00000340058 TMEM249Q2WGJ8 235 aa11.71□□□□□ -0.54
RET-201ENST00000340058 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.54
RET-201ENST00000340058 SFTA2Q6UW10 78 aa11.7□□□□□ -0.54
RET-201ENST00000340058 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
RET-201ENST00000340058 LINC00469Q8N7U9 141 aa11.7□□□□□ -0.54
RET-201ENST00000340058 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
RET-201ENST00000340058 NDUFA3O95167 84 aa11.7□□□□□ -0.54
RET-201ENST00000340058 KAAG1Q9UBP8 84 aa11.7□□□□□ -0.54
RET-201ENST00000340058 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
RET-201ENST00000340058 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
RET-201ENST00000340058 PRR20EP86478 221 aa11.7□□□□□ -0.54
RET-201ENST00000340058 PRR20CP86479 221 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms