RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NEU4Q8WWR8 484 aaPredicted RBP14.91□□□□□ -0.02
PSPC1-201ENST00000338910 ITLN2Q8WWU7 325 aaPredicted RBP14.91□□□□□ -0.02
PSPC1-201ENST00000338910 TMUB1Q9BVT8 246 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 RPH3ALQ9UNE2 315 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 FLNCQ14315 2725 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 ZFYVE26Q68DK2 2539 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 NAV3Q8IVL0 2385 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 FAM231BA6NCW3 169 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 CHEK1O14757 476 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 IGHV3-48P01763 117 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 BPIFA4PQ86YQ2 179 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 FMC1Q96HJ9 113 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 RAB1BQ9H0U4 201 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 MRPL36Q9P0J6 103 aaKnown RBP14.91□□□□□ -0.02
PSPC1-201ENST00000338910 USP24Q9UPU5 2620 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 AKAP6Q13023 2319 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 PPIAL4CA0A0B4J2A2 164 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 A0A1W2PPR1 153 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 APOHP02749 345 aaPredicted RBP14.9□□□□□ -0.02
PSPC1-201ENST00000338910 PPIAL4GP0DN37 164 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 BMI1P35226 326 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 GAGE10A6NGK3 116 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 TMEM238C9JI98 176 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 WT1-ASQ06250 92 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 TMEM97Q5BJF2 176 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 C10orf55Q5SWW7 151 aa14.9□□□□□ -0.02
PSPC1-201ENST00000338910 NPIPB6E9PJ23 425 aa14.89□□□□□ -0.03
PSPC1-201ENST00000338910 IGLV2-23P01705 113 aa14.89□□□□□ -0.03
PSPC1-201ENST00000338910 HTR1DP28221 377 aa14.89□□□□□ -0.03
PSPC1-201ENST00000338910 C5orf17Q8NAS9 161 aa14.89□□□□□ -0.03
PSPC1-201ENST00000338910 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.88□□□□□ -0.03
PSPC1-201ENST00000338910 HAX1O00165 279 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 SLC25A17O43808 307 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 NBEAP1P0C6P0 100 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 COX7A1P24310 79 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 C11orf71Q6IPW1 123 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 FER1L6-AS1Q8NA97 138 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 DAZAP1Q96EP5 407 aaKnown RBP14.88□□□□□ -0.03
PSPC1-201ENST00000338910 PERPQ96FX8 193 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 CGB1A6NKQ9 187 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 SNAI2O43623 268 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 TMEM167AQ8TBQ9 72 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 ZNF747Q9BV97 191 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 TPSG1Q9NRR2 321 aa14.88□□□□□ -0.03
PSPC1-201ENST00000338910 OVOL3O00110 214 aa14.87□□□□□ -0.03
PSPC1-201ENST00000338910 MC5RP33032 325 aa14.87□□□□□ -0.03
PSPC1-201ENST00000338910 VSTM2AQ8TAG5 236 aa14.87□□□□□ -0.03
PSPC1-201ENST00000338910 TCRAP04437 139 aa14.87□□□□□ -0.03
PSPC1-201ENST00000338910 CSN3P07498 182 aa14.87□□□□□ -0.03
PSPC1-201ENST00000338910 FGF6P10767 208 aa14.87□□□□□ -0.03
PSPC1-201ENST00000338910 PLXNB1O43157 2135 aa14.87□□□□□ -0.03
PSPC1-201ENST00000338910 C19orf84I3L1E1 186 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 IGLV1-47P01700 117 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 ORM2P19652 201 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 RIPPLY3P57055 190 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 OR1B1Q8NGR6 318 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 AP5S1Q9NUS5 200 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 ONECUT1Q9UBC0 465 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 NCR2O95944 276 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 GTF2H5Q6ZYL4 71 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 LHFPL4Q7Z7J7 247 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 TEX45Q8NA69 505 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 JMJD8Q96S16 334 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 TIMM8BQ9Y5J9 83 aaPredicted RBP14.86□□□□□ -0.03
PSPC1-201ENST00000338910 INSIG2Q9Y5U4 225 aa14.86□□□□□ -0.03
PSPC1-201ENST00000338910 ARHGAP32A7KAX9 2087 aa14.85□□□□□ -0.03
PSPC1-201ENST00000338910 BUB1B-PAK6H3BSN5 160 aa14.85□□□□□ -0.03
PSPC1-201ENST00000338910 VMA21Q3ZAQ7 101 aa14.85□□□□□ -0.03
PSPC1-201ENST00000338910 C9orf118A6NHY6 69 aa14.85□□□□□ -0.03
PSPC1-201ENST00000338910 GP9P14770 177 aa14.85□□□□□ -0.03
PSPC1-201ENST00000338910 OR4A5Q8NH83 315 aa14.85□□□□□ -0.03
PSPC1-201ENST00000338910 DPF1Q92782 380 aa14.85□□□□□ -0.03
PSPC1-201ENST00000338910 C22orf46C9J442 243 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 G3V4G9 280 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 H3BRM9 83 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 CNTFRP26992 372 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 COL8A1P27658 744 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 SUB1P53999 127 aaKnown RBP eCLIP14.84□□□□□ -0.03
PSPC1-201ENST00000338910 TNFRSF14Q92956 283 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 TIMD4Q96H15 378 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 Q9H3A6 140 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 MYO18BQ8IUG5 2567 aa14.84□□□□□ -0.03
PSPC1-201ENST00000338910 IGHV1-3A0A0C4DH29 117 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 LGALS7P47929 136 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 RUSC1-AS1Q66K80 236 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 Q86TA4 180 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 SVEP1Q4LDE5 3571 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 H3BTX0 84 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 PAX2Q02962 417 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 DTX2Q86UW9 622 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 CIARTQ8N365 385 aaPredicted RBP14.83□□□□□ -0.04
PSPC1-201ENST00000338910 RABAC1Q9UI14 185 aa14.83□□□□□ -0.04
PSPC1-201ENST00000338910 USP9XQ93008 2570 aaPredicted RBP14.82□□□□□ -0.04
PSPC1-201ENST00000338910 TRAV8-1A0A0A6YYK1 113 aa14.82□□□□□ -0.04
PSPC1-201ENST00000338910 K7EP34 96 aa14.82□□□□□ -0.04
PSPC1-201ENST00000338910 CSN1S1P47710 185 aa14.82□□□□□ -0.04
PSPC1-201ENST00000338910 MRGPRG-AS1Q2M3A8 158 aa14.82□□□□□ -0.04
PSPC1-201ENST00000338910 OR10AG1Q8NH19 301 aa14.82□□□□□ -0.04
PSPC1-201ENST00000338910 C8orf46Q8TAG6 207 aa14.82□□□□□ -0.04
PSPC1-201ENST00000338910 A0A1B0GUT8 65 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms