RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 VN1R17PQ8TDU5 208 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 FAM168AQ92567 244 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 CCL17Q92583 94 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 SERTAD4Q9NUC0 356 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 TRAV30A0A087WSZ9 112 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 HIGD1CA8MV81 97 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 I3L2K1 104 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 NDUFA3O95167 84 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 FRMD6-AS1P0C7T7 363 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 PDE6HQ13956 83 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 TNXAQ16473 311 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 RBPMS2Q6ZRY4 209 aaKnown RBP8.53□□□□□ -1.04
RTN3-201ENST00000338850 Q86TA4 180 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 OR8B3Q8NGG8 313 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 BORCS7Q96B45 105 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 RCHY1Q96PM5 261 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 OR8B2Q96RD0 313 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 RAB1BQ9H0U4 201 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 Q9H3A6 140 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 TPSG1Q9NRR2 321 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 ZFP30Q9Y2G7 519 aa8.53□□□□□ -1.04
RTN3-201ENST00000338850 PGPA6NDG6 321 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 OOSP1A8MZH6 123 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 VWC2LB2RUY7 222 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 H3BRN7 92 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 M0R1W7 72 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 HSBP1O75506 76 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 MOSP00540 346 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 P01737 135 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 OR5AL1P0C617 328 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 C3orf79P0CE67 100 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 IGLC2P0DOY2 106 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 IGLC3P0DOY3 106 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 TCL1AP56279 114 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 NPBQ8NG41 125 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 OR11H6Q8NGC7 330 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 OR1B1Q8NGR6 318 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 SRSF12Q8WXF0 261 aaKnown RBP8.52□□□□□ -1.05
RTN3-201ENST00000338850 NDFIP1Q9BT67 221 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 TMEM160Q9NX00 188 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 MRPS16Q9Y3D3 137 aaKnown RBP8.52□□□□□ -1.05
RTN3-201ENST00000338850 INSIG2Q9Y5U4 225 aa8.52□□□□□ -1.05
RTN3-201ENST00000338850 LINC00614P0C842 121 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 KRTDAPP60985 99 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 KLK9Q2XQG4 91 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 GDF5OSQ5U4N7 250 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 ZNF705AQ6ZN79 300 aaPredicted RBP8.51□□□□□ -1.05
RTN3-201ENST00000338850 RPEQ96AT9 228 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 SHANK2-AS3Q9BTD1 123 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 SLC25A39Q9BZJ4 359 aaPredicted RBP8.51□□□□□ -1.05
RTN3-201ENST00000338850 KLK9Q9UKQ9 250 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 RNF114Q9Y508 228 aa8.51□□□□□ -1.05
RTN3-201ENST00000338850 FAM181BA6NEQ2 426 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 C2orf70A6NJV1 201 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 NPIPB5A8MRT5 1133 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 K7EQM0 130 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 NDUFS8O00217 210 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 LIPFP07098 398 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 ORM2P19652 201 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
RTN3-201ENST00000338850 S100A7P31151 101 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 FCGR2BP31994 310 aaPredicted RBP8.5□□□□□ -1.05
RTN3-201ENST00000338850 CEACAM3P40198 252 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 KIAA1644Q3SXP7 199 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 COL5A1-AS1Q5SY13 56 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 C1orf122Q6ZSJ8 110 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 BPIFA4PQ86YQ2 179 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 KIR3DL3Q8N743 410 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 LINC00479Q96M42 142 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 RASL11BQ9BPW5 248 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 PIMREGQ9BSJ6 248 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 SSBP3Q9BWW4 388 aaPredicted RBP8.5□□□□□ -1.05
RTN3-201ENST00000338850 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 PAM16Q9Y3D7 125 aa8.5□□□□□ -1.05
RTN3-201ENST00000338850 TRAV9-2A0A087WT02 112 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 TRAV34A0A0B4J273 112 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 PPIAL4CA0A0B4J2A2 164 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 IGHV4-61A0A0C4DH41 118 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 MRPS12O15235 138 aaKnown RBP8.49□□□□□ -1.05
RTN3-201ENST00000338850 DLEU1O43261 78 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 CA1P00915 261 aaPredicted RBP8.49□□□□□ -1.05
RTN3-201ENST00000338850 IGKV1-17P01599 117 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 APOHP02749 345 aaPredicted RBP8.49□□□□□ -1.05
RTN3-201ENST00000338850 PPIAL4GP0DN37 164 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 PSG1P11464 419 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 GNG5P63218 68 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 ZNF124Q15973 351 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 CFHR4Q92496 578 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 DAZAP1Q96EP5 407 aaKnown RBP8.49□□□□□ -1.05
RTN3-201ENST00000338850 RITA1Q96K30 269 aa8.49□□□□□ -1.05
RTN3-201ENST00000338850 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
RTN3-201ENST00000338850 WI2-2373I1.2A0A1W2PRP0 233 aa8.48□□□□□ -1.05
RTN3-201ENST00000338850 K7EIM0 57 aa8.48□□□□□ -1.05
RTN3-201ENST00000338850 NBR2O15453 112 aa8.48□□□□□ -1.05
RTN3-201ENST00000338850 ENSAO43768 121 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms