RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM166AQ6J272 317 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 REPIN1Q9BWE0 567 aaKnown RBP8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 PRO1854Q9UHT4 67 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 IQCF6A8MYZ5 107 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 LYRM9A8MSI8 78 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 VN1R4Q7Z5H5 301 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 D6R8Y8 96 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 TNRC6BQ9UPQ9 1833 aaKnown RBP8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 WDR87Q6ZQQ6 2873 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 MYMXA0A1B0GTQ4 84 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 C15orf61A6NNL5 157 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 TCF15Q12870 199 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 C1orf162Q8NEQ5 155 aaPredicted RBP8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 TCRBV4S1A1TA0A5B7 111 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 IGKV1D-33P01593 117 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 IGKV1-33P01594 117 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 CELA3AP09093 270 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 TRIP6Q15654 476 aaKnown RBP8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 SAA2-SAA4A0A096LPE2 208 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 NPIPB5A8MRT5 1133 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 FXYD7P58549 80 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 BMPERQ8N8U9 685 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 K7EMI3 77 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 ERCC8Q13216 396 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 A0A087WX48 190 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 WNT2P09544 360 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 COL9A1P20849 921 aa8.59□□□□□ -1.03
SPTBN1-201ENST00000333896 C2CD4DB7Z1M9 353 aa8.59□□□□□ -1.04
SPTBN1-201ENST00000333896 LINC00271P0C7V0 271 aa8.59□□□□□ -1.04
SPTBN1-201ENST00000333896 SUPT4H1P63272 117 aaKnown RBP8.59□□□□□ -1.04
SPTBN1-201ENST00000333896 PEMTQ9UBM1 199 aa8.59□□□□□ -1.04
SPTBN1-201ENST00000333896 MST1LQ2TV78 715 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 IGLL1P15814 213 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 FAM90A1Q86YD7 464 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 LYPD1Q8N2G4 141 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 IGLC1P0CG04 106 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 DEFB123Q8N688 67 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 SMIM27A0A1W2PRY6 76 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 ZNF474Q6S9Z5 364 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 C15orf53Q8NAA6 179 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 OR13A1Q8NGR1 328 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 PTH2Q96A98 100 aa8.58□□□□□ -1.04
SPTBN1-201ENST00000333896 ATP5J2P56134 94 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 HERV-K104P63124 156 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 ZC2HC1BQ5TFG8 222 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 IGHV1OR21-1A0A087WYE8 117 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 SHISA9B4DS77 424 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 LTBRP36941 435 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 RPP25LQ8N5L8 163 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 WIPF2Q8TF74 440 aaPredicted RBP8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 C21orf62Q9NYP8 219 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 GATA2P23769 480 aaPredicted RBP8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 DTX1Q86Y01 620 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 RASL10AQ92737 203 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 NPYP01303 97 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 CELA2BP08218 269 aaPredicted RBP8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 PVRIGQ6DKI7 326 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 HAPLN4Q86UW8 402 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 ZNRF1Q8ND25 227 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 WFDC9Q8NEX5 89 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 TMEM54Q969K7 222 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 ZNF462Q96JM2 2506 aa8.57□□□□□ -1.04
SPTBN1-201ENST00000333896 TIMM23O14925 209 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 NDUFV3P56181 108 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 TTTY12Q9BZ98 90 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 PDE6HQ13956 83 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 CTGFP29279 349 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 SYNJ2BPP57105 145 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 TMEM196Q5HYL7 178 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 TMEM243Q9BU79 118 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 LILRA1O75019 489 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 TMEM14EPQ6UXP3 125 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 TIMM21Q9BVV7 248 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 PIEZO1Q92508 2521 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 TNS1Q9HBL0 1735 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 ACANP16112 2415 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 TRGV11A0A075B6L2 103 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 NBL1P41271 181 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 WDR83OSQ9Y284 106 aa8.56□□□□□ -1.04
SPTBN1-201ENST00000333896 H3BQ85 93 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 ZNF721Q8TF20 911 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 KLF5Q13887 457 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 MORN5Q5VZ52 161 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 THAP8Q8NA92 274 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 RSPO2Q6UXX9 243 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 FAM60AQ9NP50 221 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 C8orf46Q8TAG6 207 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 UQCRQO14949 82 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 FAM231DQ6ZW35 169 aa8.55□□□□□ -1.04
SPTBN1-201ENST00000333896 RS1O15537 224 aa8.54□□□□□ -1.04
SPTBN1-201ENST00000333896 PPP1R32Q7Z5V6 425 aa8.54□□□□□ -1.04
SPTBN1-201ENST00000333896 MYOD1P15172 320 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms