RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 TWIST1Q15672 202 aa6.95□□□□□ -1.3
LIMK2-201ENST00000331728 ZC2HC1AQ96GY0 325 aa6.95□□□□□ -1.3
LIMK2-201ENST00000331728 RAB1BQ9H0U4 201 aa6.95□□□□□ -1.3
LIMK2-201ENST00000331728 CSTL1Q9H114 145 aa6.95□□□□□ -1.3
LIMK2-201ENST00000331728 MEGF9Q9H1U4 602 aa6.95□□□□□ -1.3
LIMK2-201ENST00000331728 FREM2Q5SZK8 3169 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 OTOGLQ3ZCN5 2332 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 FSTL3O95633 263 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 CRYGCP07315 174 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 ORMDL3Q8N138 153 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 C8orf31Q8N9H6 132 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 TIMD4Q96H15 378 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 D6R8Y8 96 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 ZNF414Q96IQ9 312 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 SHANK2-AS3Q9BTD1 123 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 THYN1Q9P016 225 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 TMEM14CQ9P0S9 112 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 TRBV19A0A075B6N1 114 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 MFAP4P55083 255 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 CACNG7P62955 275 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 PSG3Q16557 428 aa6.94□□□□□ -1.3
LIMK2-201ENST00000331728 NBEAQ8NFP9 2946 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 ZNF785A8K8V0 405 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 BUB1B-PAK6H3BSN5 160 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 TIMM23O14925 209 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 IGFL3Q6UXB1 125 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 COL27A1Q8IZC6 1860 aaPredicted RBP6.93□□□□□ -1.3
LIMK2-201ENST00000331728 SPTBN1Q01082 2364 aaKnown RBP6.93□□□□□ -1.3
LIMK2-201ENST00000331728 A1L4Q6 167 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 B9A039 149 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 PRSS1P07477 247 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 APOBEC3AP31941 199 aaPredicted RBP6.93□□□□□ -1.3
LIMK2-201ENST00000331728 IFI27P40305 119 aaPredicted RBP6.93□□□□□ -1.3
LIMK2-201ENST00000331728 PLP1P60201 277 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 KLF17Q5JT82 389 aaPredicted RBP6.93□□□□□ -1.3
LIMK2-201ENST00000331728 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 NEU4Q8WWR8 484 aaPredicted RBP6.93□□□□□ -1.3
LIMK2-201ENST00000331728 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 APC2O95996 2303 aa6.93□□□□□ -1.3
LIMK2-201ENST00000331728 FAM90A27PA6NNH2 459 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 CEACAM4O75871 244 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 RPL7P18124 248 aaKnown RBP6.92□□□□□ -1.3
LIMK2-201ENST00000331728 FXYD7P58549 80 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 C2orf91Q6ZV80 131 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 PIP4P1Q86T03 277 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 WFDC3Q8IUB2 231 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 C17orf77Q96MU5 243 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 ZNF747Q9BV97 191 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 HBDP02042 147 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 BMI1P35226 326 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 C18orf15Q96N68 181 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 COL25A1Q9BXS0 654 aaPredicted RBP6.92□□□□□ -1.3
LIMK2-201ENST00000331728 MED13LQ71F56 2210 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 NBR2O15453 112 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 IGHV3-23P01764 117 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 RIPPLY3P57055 190 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 RUSC1-AS1Q66K80 236 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 DPM3Q9P2X0 92 aa6.92□□□□□ -1.3
LIMK2-201ENST00000331728 RAI1Q7Z5J4 1906 aaPredicted RBP6.92□□□□□ -1.3
LIMK2-201ENST00000331728 IGKV2-40A0A087WW87 121 aaPredicted RBP6.91□□□□□ -1.3
LIMK2-201ENST00000331728 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 E7EQL1 145 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 K7EM74 188 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 SAP30O75446 220 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 IGKV2D-40P01614 121 aaPredicted RBP6.91□□□□□ -1.3
LIMK2-201ENST00000331728 PRSS33Q8NF86 280 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 MAP1LC3AQ9H492 121 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 KAAG1Q9UBP8 84 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 IGHV3-35A0A0C4DH35 117 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 H3BRM9 83 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 H3BRN7 92 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 IGKV1-17P01599 117 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 TMEM11P17152 192 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 TMEM190Q8WZ59 177 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 CACNA1BQ00975 2339 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 H3BUT2 72 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 SH2D1AO60880 128 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 NCR2O95944 276 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 C21orf62Q9NYP8 219 aa6.91□□□□□ -1.3
LIMK2-201ENST00000331728 IGHV3OR16-8A0A075B7F1 116 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.9□□□□□ -1.3
LIMK2-201ENST00000331728 TEX22C9J3V5 150 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 ABHD17AQ96GS6 310 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 NAA38Q9BRA0 125 aaKnown RBP6.9□□□□□ -1.3
LIMK2-201ENST00000331728 SELENOKQ9Y6D0 94 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 SMKR1H3BMG3 65 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 I3L2K1 104 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 THBDP07204 575 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 HSD52Q0P140 79 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 TM4SF20Q53R12 229 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 OR1N2Q8NGR9 330 aa6.9□□□□□ -1.3
LIMK2-201ENST00000331728 DPF1Q92782 380 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms