RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SRRM4A7MD48 611 aaKnown RBP11.36□□□□□ -0.59
EPHB3-201ENST00000330394 CKS1BP61024 79 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 PRR20EP86478 221 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 PRR20CP86479 221 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 PRR20DP86480 221 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 PRR20BP86481 221 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 PRR20AP86496 221 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 TMEM158Q8WZ71 300 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 YPEL4Q96NS1 127 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 SLC25A2Q9BXI2 301 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 CCL21O00585 134 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 ARPC1AQ92747 370 aa11.36□□□□□ -0.59
EPHB3-201ENST00000330394 CHAC1Q9BUX1 264 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 CACNA1AO00555 2505 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 SH2D1AO60880 128 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 PPBPP02775 128 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 CDKN1BP46527 198 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 CRIP3Q6Q6R5 217 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 TRGV9Q99603 122 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 IGHV3-64A0A075B6Q5 118 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 SSBP2P81877 361 aaPredicted RBP11.35□□□□□ -0.59
EPHB3-201ENST00000330394 LY6EQ16553 131 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 TP73-AS1Q9UF72 201 aa11.35□□□□□ -0.59
EPHB3-201ENST00000330394 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
EPHB3-201ENST00000330394 TANC2Q9HCD6 1990 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 MORN5Q5VZ52 161 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 WFDC12Q8WWY7 111 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 ANAPC13Q9BS18 74 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 C15orf65H3BRN8 121 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 NBR2O15453 112 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 TMPRSS3P57727 454 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 FAM159AQ6UWV7 190 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 AMTNQ6UX39 209 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 GAFA1Q96PS6 74 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 TRAV40A0A0B4J280 105 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 COX8AP10176 69 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 PRTN3P24158 256 aa11.34□□□□□ -0.59
EPHB3-201ENST00000330394 SRSF6Q13247 344 aaKnown RBP11.34□□□□□ -0.59
EPHB3-201ENST00000330394 C9orf118A6NHY6 69 aa11.33□□□□□ -0.59
EPHB3-201ENST00000330394 LINC00527Q9UJ94 153 aa11.33□□□□□ -0.59
EPHB3-201ENST00000330394 K7ERJ3 54 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 SRSF1Q07955 248 aaKnown RBP eCLIP11.33□□□□□ -0.6
EPHB3-201ENST00000330394 LYPD2Q6UXB3 125 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 TPSG1Q9NRR2 321 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 SLC25A15Q9Y619 301 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 OBSL1O75147 1896 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 IGHV3-11P01762 117 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 IGHV4-39P01824 125 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 ASIPP42127 132 aa11.33□□□□□ -0.6
EPHB3-201ENST00000330394 ZNF106Q9H2Y7 1883 aaKnown RBP11.33□□□□□ -0.6
EPHB3-201ENST00000330394 ADIPOQQ15848 244 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 CHTOPQ9Y3Y2 248 aaKnown RBP11.32□□□□□ -0.6
EPHB3-201ENST00000330394 CNTFRP26992 372 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 TEX29Q8N6K0 151 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 SORL1Q92673 2214 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 BPTFQ12830 3046 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 DIAPH2-AS1Q14236 149 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
EPHB3-201ENST00000330394 PSMB11A5LHX3 300 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 FNDC10F2Z333 226 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 H3BRM9 83 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 C8orf49Q96NF6 230 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 SIGLEC9Q9Y336 463 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 IGHV1-8P0DP01 117 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 RNASE4P34096 147 aaKnown RBP11.31□□□□□ -0.6
EPHB3-201ENST00000330394 PLSCR4Q9NRQ2 329 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 RAB9AP51151 201 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
EPHB3-201ENST00000330394 LY6G6EA0A0G2JKS1 128 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
EPHB3-201ENST00000330394 C17orf58Q2M2W7 97 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 C1orf122Q6ZSJ8 110 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 MDS2Q8NDY4 140 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 U3KQA8 63 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 MYO18BQ8IUG5 2567 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 A8MWV9 139 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 TRGV3P03979 118 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
EPHB3-201ENST00000330394 MYO9AB2RTY4 2548 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 ADAMTS9Q9P2N4 1935 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 NUP210Q8TEM1 1887 aaPredicted RBP11.3□□□□□ -0.6
EPHB3-201ENST00000330394 H3BMG7 143 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 SP9P0CG40 484 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 RHOGP84095 191 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 Q6ZSR3 168 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 FXYD5Q96DB9 178 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 KMT2EQ8IZD2 1858 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms