RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 EMP1P54849 157 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 C5orf64Q2M2E5 130 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 OR11H1Q8NG94 326 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 OR11H2Q8NH07 326 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 LCNL1Q6ZST4 164 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 CD7P09564 240 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 ARMS2P0C7Q2 107 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 UTF1Q5T230 341 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 TPTE2P1Q5T6R2 138 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 RNF182Q8N6D2 247 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 LOXP28300 417 aaPredicted RBP13.29□□□□□ -0.28
CLIP4-201ENST00000320081 ERCC8Q13216 396 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 RNF138Q8WVD3 245 aa13.29□□□□□ -0.28
CLIP4-201ENST00000320081 FNDC4Q9H6D8 234 aaPredicted RBP13.29□□□□□ -0.28
CLIP4-201ENST00000320081 ACANP16112 2415 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 A0A087X0K7 114 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 IGHV3-64A0A075B6Q5 118 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 A0A0U1RRA0 63 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 H3BUX3 64 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 RPS20P60866 119 aaKnown RBP13.28□□□□□ -0.28
CLIP4-201ENST00000320081 MSMPQ1L6U9 139 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 SNHG12Q9BXW3 62 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 ZNF688P0C7X2 276 aa13.28□□□□□ -0.28
CLIP4-201ENST00000320081 TRAV9-2A0A087WT02 112 aa13.27□□□□□ -0.28
CLIP4-201ENST00000320081 DKK4Q9UBT3 224 aa13.27□□□□□ -0.28
CLIP4-201ENST00000320081 PVRIGQ6DKI7 326 aa13.27□□□□□ -0.28
CLIP4-201ENST00000320081 KIR2DL4Q99706 377 aa13.27□□□□□ -0.28
CLIP4-201ENST00000320081 SPRY2O43597 315 aa13.27□□□□□ -0.29
CLIP4-201ENST00000320081 MPV17L2Q567V2 206 aa13.27□□□□□ -0.29
CLIP4-201ENST00000320081 TMEM213A2RRL7 107 aa13.27□□□□□ -0.29
CLIP4-201ENST00000320081 SLAQ13239 276 aa13.27□□□□□ -0.29
CLIP4-201ENST00000320081 NHP2Q9NX24 153 aaKnown RBP13.27□□□□□ -0.29
CLIP4-201ENST00000320081 CENPEQ02224 2701 aa13.27□□□□□ -0.29
CLIP4-201ENST00000320081 SAA4P35542 130 aa13.26□□□□□ -0.29
CLIP4-201ENST00000320081 IGHV3-73A0A0B4J1V6 119 aa13.26□□□□□ -0.29
CLIP4-201ENST00000320081 RPL13AP40429 203 aaKnown RBP13.26□□□□□ -0.29
CLIP4-201ENST00000320081 TSPOP30536 169 aa13.26□□□□□ -0.29
CLIP4-201ENST00000320081 ASIPP42127 132 aa13.26□□□□□ -0.29
CLIP4-201ENST00000320081 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
CLIP4-201ENST00000320081 C17orf77Q96MU5 243 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 FRMD6-AS1P0C7T7 363 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 CFHR2P36980 270 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 SNRPD3P62318 126 aaKnown RBP13.25□□□□□ -0.29
CLIP4-201ENST00000320081 TMEM75Q8N9X5 138 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 TMEM249Q2WGJ8 235 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 NDUFA4L2Q9NRX3 87 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 POLR3KQ9Y2Y1 108 aaPredicted RBP13.25□□□□□ -0.29
CLIP4-201ENST00000320081 SZT2Q5T011 3432 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 FAM181BA6NEQ2 426 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 DLEU1O43261 78 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 IGLV1-44P01699 117 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 TMEM155Q4W5P6 130 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 CTSZQ9UBR2 303 aa13.25□□□□□ -0.29
CLIP4-201ENST00000320081 PAX8Q06710 450 aa13.24□□□□□ -0.29
CLIP4-201ENST00000320081 STPG4Q8N801 248 aa13.24□□□□□ -0.29
CLIP4-201ENST00000320081 ZNF418Q8TF45 676 aaPredicted RBP13.24□□□□□ -0.29
CLIP4-201ENST00000320081 C1orf194Q5T5A4 169 aa13.24□□□□□ -0.29
CLIP4-201ENST00000320081 NDUFB8O95169 186 aa13.24□□□□□ -0.29
CLIP4-201ENST00000320081 NPSP0C0P6 89 aa13.24□□□□□ -0.29
CLIP4-201ENST00000320081 IFI27L1Q96BM0 104 aa13.24□□□□□ -0.29
CLIP4-201ENST00000320081 RAB9AP51151 201 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 GTSCR1Q86UQ5 136 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 RCHY1Q96PM5 261 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 TRAV9-1A0A075B6T8 112 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 TRGV9Q99603 122 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 VPS13AQ96RL7 3174 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 PSMG4Q5JS54 123 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 C5orf30Q96GV9 206 aa13.23□□□□□ -0.29
CLIP4-201ENST00000320081 NUPR1O60356 82 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 AMMECR1LQ6DCA0 310 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 CRIP3Q6Q6R5 217 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 Q6ZVH6 145 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 Q6ZWC4 215 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 RITA1Q96K30 269 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 C8orf49Q96NF6 230 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
CLIP4-201ENST00000320081 LDLRAD2Q5SZI1 272 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 Q8NFD4 153 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 NUP37Q8NFH4 326 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 FCN3O75636 299 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 HBDP02042 147 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 MAJINQ3KP22 176 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 OR5AN1Q8NGI8 311 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 SH2D1AO60880 128 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 HLA-DMBP28068 263 aa13.22□□□□□ -0.29
CLIP4-201ENST00000320081 CD300EQ496F6 205 aaPredicted RBP13.22□□□□□ -0.29
CLIP4-201ENST00000320081 TRAV41A0A0B4J266 112 aa13.21□□□□□ -0.29
CLIP4-201ENST00000320081 C18orf32Q8TCD1 76 aa13.21□□□□□ -0.29
CLIP4-201ENST00000320081 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.29
CLIP4-201ENST00000320081 K7EN84 100 aa13.21□□□□□ -0.29
CLIP4-201ENST00000320081 RIPPLY3P57055 190 aa13.21□□□□□ -0.29
CLIP4-201ENST00000320081 C14orf178Q8N769 122 aaPredicted RBP13.21□□□□□ -0.29
CLIP4-201ENST00000320081 LGALS3P17931 250 aaKnown RBP13.21□□□□□ -0.3
CLIP4-201ENST00000320081 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.3
CLIP4-201ENST00000320081 BEND2Q8NDZ0 799 aa13.21□□□□□ -0.3
CLIP4-201ENST00000320081 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.3
CLIP4-201ENST00000320081 FAM169BQ8N8A8 192 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms