RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 BMI1P35226 326 aa11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 FAM24BQ8N5W8 94 aa11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 SAT2Q96F10 170 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 RGS13O14921 159 aa11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 DEFB1P60022 68 aa11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 YTHDF2Q9Y5A9 579 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-202ENST00000318007 PAGE4O60829 102 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 C16orf92Q96LL3 132 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 RARRES2Q99969 163 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 NRN1Q9NPD7 142 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 TRBV19A0A075B6N1 114 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 HELTA6NFD8 242 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 FAM90A2PQ658T7 463 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 LINC00052Q96N35 136 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 TMEM14CQ9P0S9 112 aa11.58□□□□□ -0.56
PDLIM5-202ENST00000318007 M0R3E3 92 aa11.57□□□□□ -0.56
PDLIM5-202ENST00000318007 NDUFB4O95168 129 aa11.57□□□□□ -0.56
PDLIM5-202ENST00000318007 HBE1P02100 147 aa11.57□□□□□ -0.56
PDLIM5-202ENST00000318007 ZNF688P0C7X2 276 aa11.57□□□□□ -0.56
PDLIM5-202ENST00000318007 ATP5G3P48201 142 aa11.57□□□□□ -0.56
PDLIM5-202ENST00000318007 TOR2AQ5JU69 321 aa11.57□□□□□ -0.56
PDLIM5-202ENST00000318007 GPR82Q96P67 336 aa11.57□□□□□ -0.56
PDLIM5-202ENST00000318007 SORL1Q92673 2214 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 ZNF705FA8MVS1 300 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 IGLV1-51P01701 117 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 ICAM4Q14773 271 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 CLLU1Q5K131 121 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 EIF5A2Q9GZV4 153 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 Q9H3A6 140 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 TMEM167BQ9NRX6 74 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 S100A1P23297 94 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 CEBPGP53567 150 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 GNG5P63218 68 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 SRSF3P84103 164 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 ZNF124Q15973 351 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 C9orf66Q5T8R8 295 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
PDLIM5-202ENST00000318007 GGTLC3B5MD39 225 aa11.55□□□□□ -0.56
PDLIM5-202ENST00000318007 RNF24Q9Y225 148 aa11.55□□□□□ -0.56
PDLIM5-202ENST00000318007 TRAV1-1A0A0B4J248 108 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 PGPA6NDG6 321 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 FAM74A7A6NL05 159 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 PSMB3P49720 205 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 WFDC9Q8NEX5 89 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 RXFP4Q8TDU9 374 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 C20orf173Q96LM9 149 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 SGK494Q96LW2 274 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 ZNF331Q9NQX6 463 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 TRAV8-2A0A0B4J237 113 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 G3V4G9 280 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 PAFAH1B2P68402 229 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 ASCL2Q99929 193 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 SIGLEC8Q9NYZ4 499 aa11.54□□□□□ -0.56
PDLIM5-202ENST00000318007 C11orf94C9JXX5 98 aa11.53□□□□□ -0.56
PDLIM5-202ENST00000318007 F6UB75 175 aa11.53□□□□□ -0.56
PDLIM5-202ENST00000318007 TSPAN4O14817 238 aa11.53□□□□□ -0.56
PDLIM5-202ENST00000318007 AAMDCQ9H7C9 122 aa11.53□□□□□ -0.56
PDLIM5-202ENST00000318007 A0A087X0K7 114 aa11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 SOCS3O14543 225 aa11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 CD7P09564 240 aa11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 BCL2P10415 239 aa11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 PRR31Q5SQ13 230 aa11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 LCN12Q6JVE5 192 aa11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 APRG1Q8IVJ8 170 aa11.52□□□□□ -0.56
PDLIM5-202ENST00000318007 NOTCH1P46531 2555 aa11.52□□□□□ -0.57
PDLIM5-202ENST00000318007 RBFOX3A6NFN3 312 aa11.52□□□□□ -0.57
PDLIM5-202ENST00000318007 GUK1Q16774 197 aa11.52□□□□□ -0.57
PDLIM5-202ENST00000318007 ZNF738Q8NE65 137 aa11.52□□□□□ -0.57
PDLIM5-202ENST00000318007 MCRIP2Q9BUT9 160 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-202ENST00000318007 MGAM2Q2M2H8 2515 aa11.52□□□□□ -0.57
PDLIM5-202ENST00000318007 PRAC2D3DTV9 90 aa11.51□□□□□ -0.57
PDLIM5-202ENST00000318007 K7EQG2 157 aa11.51□□□□□ -0.57
PDLIM5-202ENST00000318007 IFNA1P01562 189 aa11.51□□□□□ -0.57
PDLIM5-202ENST00000318007 COMMD7Q86VX2 200 aa11.51□□□□□ -0.57
PDLIM5-202ENST00000318007 MANBALQ9NQG1 85 aa11.51□□□□□ -0.57
PDLIM5-202ENST00000318007 ZNF256Q9Y2P7 627 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-202ENST00000318007 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 SCO2A0A1W2PP80 73 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 DEFB131AP59861 70 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 PDE6HQ13956 83 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 GDF5OSQ5U4N7 250 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 SLC7A5P1Q8MH63 180 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 SUN5Q8TC36 379 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 LINC00479Q96M42 142 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 SPAG8Q99932 426 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 LOC102723971A0A1B0GUV8 181 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 IGKV3-20P01619 116 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms