RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 AURKAIP1Q9NWT8 199 aaPredicted RBP7.21□□□□□ -1.26
COL6A5-202ENST00000312481 SLC25A15Q9Y619 301 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 B3GALT5-AS1P59052 145 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 C18orf32Q8TCD1 76 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 ANKRD17O75179 2603 aaKnown RBP7.2□□□□□ -1.26
COL6A5-202ENST00000312481 TRGV3P03979 118 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 ZNF826PQ6ZT77 177 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 SPATA12Q7Z6I5 190 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 SIGLEC9Q9Y336 463 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 IGKV1-12A0A0C4DH73 117 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 NKX2-8O15522 239 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 IGKV1D-12P01611 117 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 RNASE2P10153 161 aaKnown RBP7.2□□□□□ -1.26
COL6A5-202ENST00000312481 ZNF415Q09FC8 603 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 CR1LQ2VPA4 569 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 ZNF329Q86UD4 541 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 IGLC2P0DOY2 106 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 IGLC3P0DOY3 106 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 PAX2Q02962 417 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 ZNF664Q8N3J9 261 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 FAM104BQ5XKR9 115 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 F8VRH5 84 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 CRPP02741 224 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 SSBP2P81877 361 aaPredicted RBP7.2□□□□□ -1.26
COL6A5-202ENST00000312481 SMIM20Q8N5G0 67 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 VOPP1Q96AW1 172 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 MEIG1Q5JSS6 88 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 Q8N8P6 123 aa7.2□□□□□ -1.26
COL6A5-202ENST00000312481 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 FOXE3Q13461 319 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 TRPT1Q86TN4 253 aaKnown RBP7.19□□□□□ -1.26
COL6A5-202ENST00000312481 FAM90A27PA6NNH2 459 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 SRSF3P84103 164 aaKnown RBP7.19□□□□□ -1.26
COL6A5-202ENST00000312481 DEFB124Q8NES8 71 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 A0A1W2PPE3 182 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 M0R381 172 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 LEPROTO15243 131 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 IGLV1-44P01699 117 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 RASL10AQ92737 203 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 SIGLEC8Q9NYZ4 499 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 NPSP0C0P6 89 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 VWCEQ96DN2 955 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 LSM4Q9Y4Z0 139 aaKnown RBP7.19□□□□□ -1.26
COL6A5-202ENST00000312481 LOC101059948A0A1B0GTJ6 334 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 ZNF815PA8K554 130 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 IGKV1D-33P01593 117 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 IGKV1-33P01594 117 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 DMRTC2Q8IXT2 367 aaPredicted RBP7.19□□□□□ -1.26
COL6A5-202ENST00000312481 SELLP14151 372 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 PRSS22Q9GZN4 317 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 V9GYV3 84 aa7.19□□□□□ -1.26
COL6A5-202ENST00000312481 H3BUT2 72 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 AGFG2O95081 481 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 BUB1B-PAK6H3BSN5 160 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 J3QLI3 93 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 CRYBA4P53673 196 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 RFPL3SP0C7P2 107 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 KIR3DS1Q14943 382 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 LY6G5BQ8NDX9 201 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 ZNF319Q9P2F9 582 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 K7EP34 96 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 PRTN3P24158 256 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 BMPERQ8N8U9 685 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 FBXL15Q9H469 300 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 A0A1W2PR80 420 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 AZU1P20160 251 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 KIAA1644Q3SXP7 199 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 FAM168AQ92567 244 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 NHP2Q9NX24 153 aaKnown RBP7.18□□□□□ -1.26
COL6A5-202ENST00000312481 GUSBP1Q15486 140 aa7.18□□□□□ -1.26
COL6A5-202ENST00000312481 CD300EQ496F6 205 aaPredicted RBP7.18□□□□□ -1.26
COL6A5-202ENST00000312481 DAZ1Q9NQZ3 744 aaKnown RBP7.18□□□□□ -1.26
COL6A5-202ENST00000312481 IGHV2-70DA0A0C4DH43 119 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 IGHV3-64DA0A0J9YX35 117 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 PSG1P11464 419 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 DMRTC1Q5HYR2 192 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 CDCP2Q5VXM1 449 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 CCL19Q99731 98 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 IGLV3-9A0A075B6K5 115 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 PCSK5Q92824 1860 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 FAM157AC9JC47 383 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 SPEM2Q0P670 501 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 HAPLN4Q86UW8 402 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 DCTN5Q9BTE1 182 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 SLAQ13239 276 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 IGHV1-18A0A0C4DH31 117 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 LYPD6Q86Y78 171 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 FDCSPQ8NFU4 85 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 IGHV1-3A0A0C4DH29 117 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 EMP1P54849 157 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 FOXA3P55318 350 aaPredicted RBP7.17□□□□□ -1.26
COL6A5-202ENST00000312481 LTAP01374 205 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
COL6A5-202ENST00000312481 IGKV1D-8A0A087WSZ0 117 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms