RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 IGKV2D-40P01614 121 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-201ENST00000310441 DEPPQ9NTK1 212 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 PTPN13Q12923 2485 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 C9JAW5 83 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 SIGLEC12Q96PQ1 595 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 H3BQ85 93 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 ADAMTSL5Q6ZMM2 481 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 TRAV13-2A0A0B4J235 113 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 TCRAP04437 139 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 CELA3BP08861 270 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 CD33P20138 364 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
HCFC1-201ENST00000310441 MMP23AO75900 390 aa12.74□□□□□ -0.37
HCFC1-201ENST00000310441 EGR2P11161 476 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-201ENST00000310441 LIME1Q9H400 295 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 A0A087X0K7 114 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 ALPK3Q96L96 1907 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 TRAV40A0A0B4J280 105 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 C4orf51C9J302 202 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 IGLV3-19P01714 112 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 LCN12Q6JVE5 192 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 SONP18583 2426 aaKnown RBP12.73□□□□□ -0.37
HCFC1-201ENST00000310441 NDUFB8O95169 186 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 OR11H6Q8NGC7 330 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 SH2D1AO60880 128 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 GATA3P23771 443 aa12.73□□□□□ -0.37
HCFC1-201ENST00000310441 EXOC3-AS1Q8N2X6 119 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 IGHG3P01860 377 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 VMO1Q7Z5L0 202 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 SRRM5B3KS81 715 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 TMEM158Q8WZ71 300 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 TRBV25-1A0A075B6N4 114 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 IGKV1D-13A0A0B4J2D9 117 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 IGKV1-13P0DP09 117 aa12.72□□□□□ -0.37
HCFC1-201ENST00000310441 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
HCFC1-201ENST00000310441 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
HCFC1-201ENST00000310441 IGHG4P01861 327 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 IGHV1-8P0DP01 117 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 LY6G6FQ5SQ64 297 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 ZNF319Q9P2F9 582 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 I3L3M4 83 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 CCL3L1P16619 93 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 C5orf64Q2M2E5 130 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 NSUN5P1Q3KNT7 163 aa12.71□□□□□ -0.37
HCFC1-201ENST00000310441 B4DSR2 109 aa12.71□□□□□ -0.38
HCFC1-201ENST00000310441 LINC01545Q5VT33 79 aa12.71□□□□□ -0.38
HCFC1-201ENST00000310441 ZNF114Q8NC26 417 aa12.71□□□□□ -0.38
HCFC1-201ENST00000310441 NDUFC2O95298 119 aa12.71□□□□□ -0.38
HCFC1-201ENST00000310441 THAP8Q8NA92 274 aa12.71□□□□□ -0.38
HCFC1-201ENST00000310441 TRBV6-6A0A0A6YYG2 114 aa12.7□□□□□ -0.38
HCFC1-201ENST00000310441 TET2Q6N021 2002 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-201ENST00000310441 TIAF1O95411 115 aa12.7□□□□□ -0.38
HCFC1-201ENST00000310441 ATRAIDQ6UW56 229 aa12.7□□□□□ -0.38
HCFC1-201ENST00000310441 IGHV1-3A0A0C4DH29 117 aa12.7□□□□□ -0.38
HCFC1-201ENST00000310441 PPIFP30405 207 aaKnown RBP12.7□□□□□ -0.38
HCFC1-201ENST00000310441 BTCP35070 178 aa12.7□□□□□ -0.38
HCFC1-201ENST00000310441 COLCA2A8K830 154 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 FOXL2P58012 376 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 ZNF474Q6S9Z5 364 aaPredicted RBP12.69□□□□□ -0.38
HCFC1-201ENST00000310441 EFNA4P52798 201 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 SPXQ9BT56 116 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 NCR2O95944 276 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 GREM1O60565 184 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 RSPO4Q2I0M5 234 aaPredicted RBP12.69□□□□□ -0.38
HCFC1-201ENST00000310441 TMEM14EPQ6UXP3 125 aa12.69□□□□□ -0.38
HCFC1-201ENST00000310441 SCRT1Q9BWW7 348 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 C9orf106Q8NAJ2 232 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 J3QRE1 110 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 C1QCP02747 245 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 ZC2HC1BQ5TFG8 222 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 CFPP27918 469 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 CFHR1Q03591 330 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-201ENST00000310441 IGHV1-24A0A0C4DH33 117 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 IGHV3-73A0A0B4J1V6 119 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 MPV17L2Q567V2 206 aa12.68□□□□□ -0.38
HCFC1-201ENST00000310441 K7EMI3 77 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 CELA3AP09093 270 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 A6NNC1 897 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 FAM201AQ5SY85 155 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 TRAV13-1A0A0B4J241 112 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 SRSF3P84103 164 aaKnown RBP12.67□□□□□ -0.38
HCFC1-201ENST00000310441 Q6ZS49 121 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 ZNF106Q9H2Y7 1883 aaKnown RBP12.67□□□□□ -0.38
HCFC1-201ENST00000310441 APOC4P55056 127 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
HCFC1-201ENST00000310441 H0YJW9 148 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 BUB1B-PAK6H3BSN5 160 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 ATP1A1-AS1Q5TC04 95 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 CXCL1P09341 107 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 TANC1Q9C0D5 1861 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 Q0VG73 95 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 TMEM200BQ69YZ2 307 aa12.66□□□□□ -0.38
HCFC1-201ENST00000310441 STPG4Q8N801 248 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms