RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF474Q6S9Z5 364 aaPredicted RBP6.68□□□□□ -1.34
VPS41-202ENST00000310301 PPDPFLQ8WWR9 84 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 DOCK4Q8N1I0 1966 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 ALPK3Q96L96 1907 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 SH2D1AO60880 128 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 LYPD3O95274 346 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 CELA3BP08861 270 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 DAZAP2Q15038 168 aaPredicted RBP6.68□□□□□ -1.34
VPS41-202ENST00000310301 TMEM167AQ8TBQ9 72 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 TRAV40A0A0B4J280 105 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 SS18L2Q9UHA2 77 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 EP400Q96L91 3159 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 MESP1Q9BRJ9 268 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 NCOR2Q9Y618 2525 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 LYL1P12980 280 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 HTN3P15516 51 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 NMSQ5H8A3 153 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 TEX43Q6ZNM6 134 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 NABP1Q96AH0 204 aa6.68□□□□□ -1.34
VPS41-202ENST00000310301 ZNF688P0C7X2 276 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 DNAJC30Q96LL9 226 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 A0A1B0GWJ7 208 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 LEPROTO15243 131 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 PRSS57Q6UWY2 283 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 AMN1Q8IY45 258 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 TRGV11A0A075B6L2 103 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 ZNF876PQ49A33 203 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 TMEM14EPQ6UXP3 125 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 Q6ZWC4 215 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 DNAJC13O75165 2243 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 SLAQ13239 276 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 ZIC4Q8N9L1 334 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 RASL10AQ92737 203 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 CSTL1Q9H114 145 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 RNF114Q9Y508 228 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 NYNRINQ9P2P1 1898 aaKnown RBP6.67□□□□□ -1.34
VPS41-202ENST00000310301 CACNA1AO00555 2505 aa6.67□□□□□ -1.34
VPS41-202ENST00000310301 IGKV1-5P01602 117 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 SELLP14151 372 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 SRSF7Q16629 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS41-202ENST00000310301 SPSB3Q6PJ21 355 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 IGHV3-73A0A0B4J1V6 119 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 IGKV1-12A0A0C4DH73 117 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 OVOL1O14753 267 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 IGKV1D-12P01611 117 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 IGHV2-5P01817 119 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 CD24P25063 80 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 DUSP14O95147 198 aaKnown RBP6.66□□□□□ -1.34
VPS41-202ENST00000310301 NTF4P34130 210 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 SIGLEC15Q6ZMC9 328 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 C18orf32Q8TCD1 76 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 SRSF8Q9BRL6 282 aaKnown RBP6.66□□□□□ -1.34
VPS41-202ENST00000310301 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 SDK2Q58EX2 2172 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 TRBV20-1A0A075B6N2 111 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 TRGV4A0A0C4DH28 118 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 RPL15P61313 204 aaKnown RBP6.66□□□□□ -1.34
VPS41-202ENST00000310301 STHQ8IWL8 128 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 DPH3P1Q9H4G8 78 aa6.66□□□□□ -1.34
VPS41-202ENST00000310301 HELZP42694 1942 aaKnown RBP6.65□□□□□ -1.34
VPS41-202ENST00000310301 VCYO14598 125 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 MSMBP08118 114 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 B3GALT5-AS1P59052 145 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 ZNF329Q86UD4 541 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 SPXQ9BT56 116 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 MDC1Q14676 2089 aaKnown RBP6.65□□□□□ -1.34
VPS41-202ENST00000310301 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 K7EM74 188 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 PFN1P07737 140 aaKnown RBP6.65□□□□□ -1.34
VPS41-202ENST00000310301 VDAC2P45880 294 aaPredicted RBP6.65□□□□□ -1.34
VPS41-202ENST00000310301 CDKN1BP46527 198 aa6.65□□□□□ -1.34
VPS41-202ENST00000310301 RTTNQ86VV8 2226 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 TRAV3A0A0B4J244 114 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 BVES-AS1Q5T3Y7 98 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 Q8TAT8 98 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 FAM215AQ9Y5M1 114 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 SNRNP200O75643 2136 aaKnown RBP6.65□□□□□ -1.35
VPS41-202ENST00000310301 IGLL1P15814 213 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 C10orf55Q5SWW7 151 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 TMEM133Q9H2Q1 129 aa6.65□□□□□ -1.35
VPS41-202ENST00000310301 B5MCH6 92 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 IGHV2-26A0A0B4J1V2 119 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 A0A1W2PNU3 283 aaPredicted RBP6.64□□□□□ -1.35
VPS41-202ENST00000310301 SOCS3O14543 225 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 C14orf178Q8N769 122 aaPredicted RBP6.64□□□□□ -1.35
VPS41-202ENST00000310301 RPUSD1Q9UJJ7 312 aaKnown RBP6.64□□□□□ -1.35
VPS41-202ENST00000310301 PMVKQ15126 192 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 C5orf24Q7Z6I8 188 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 C1QTNF4Q9BXJ3 329 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 TMEM126AQ9H061 195 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 GAGE12JA6NER3 117 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 GAGE7O76087 117 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 GAGE12FP0CL80 117 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 GAGE12GP0CL81 117 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 GAGE12IP0CL82 117 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 COX8AP10176 69 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms