RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 BTF3L4Q96K17 158 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 GPR82Q96P67 336 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 SMAD5-AS1Q9Y6J3 95 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 NAV2Q8IVL1 2488 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 MXRA5Q9NR99 2828 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 TRAV41A0A0B4J266 112 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 SPINK4O60575 86 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 CBLN1P23435 193 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 SLC35B1P78383 322 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 COA6Q5JTJ3 125 aaKnown RBP5.08□□□□□ -1.6
USP47-201ENST00000305481 TOMM20LQ6UXN7 152 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 CLEC19AQ6UXS0 136 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 FAM231DQ6ZW35 169 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 OR4F17Q8NGA8 305 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 ZFAND3Q9H8U3 227 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 SERTAD4Q9NUC0 356 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 PITPNC1Q9UKF7 332 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 XKRY2A2RUG3 117 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 CLPSL1A2RUU4 121 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 ZNF705GA8MUZ8 300 aaPredicted RBP5.07□□□□□ -1.6
USP47-201ENST00000305481 BLCAPP62952 87 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 PRR27Q6MZM9 219 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 GOLT1AQ6ZVE7 132 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 LINC01356Q8N9X3 169 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 SMIM12Q96EX1 92 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 M0R3E3 92 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 IGF1P05019 195 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 SMIM6P0DI80 62 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 GATA3P23771 443 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 NOL4LQ96MY1 436 aaPredicted RBP5.07□□□□□ -1.6
USP47-201ENST00000305481 ASCL2Q99929 193 aa5.07□□□□□ -1.6
USP47-201ENST00000305481 KMT2BQ9UMN6 2715 aaPredicted RBP5.06□□□□□ -1.6
USP47-201ENST00000305481 IGHG2P01859 326 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 S100A9P06702 114 aaKnown RBP5.06□□□□□ -1.6
USP47-201ENST00000305481 NPSP0C0P6 89 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 IER3P46695 156 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 Q86TA4 180 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 TMEM183AQ8IXX5 376 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 LYPD1Q8N2G4 141 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 PRSS22Q9GZN4 317 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 GAR1Q9NY12 217 aaKnown RBP5.06□□□□□ -1.6
USP47-201ENST00000305481 RABAC1Q9UI14 185 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 A0A1B0GUS0 222 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 C19orf71A6NCJ1 209 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 RNF223E7ERA6 249 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 IGHG4P01861 327 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 PPIFP30405 207 aaKnown RBP5.06□□□□□ -1.6
USP47-201ENST00000305481 CIARTQ8N365 385 aaPredicted RBP5.06□□□□□ -1.6
USP47-201ENST00000305481 CMTM2Q8TAZ6 248 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 HIST1H2BLQ99880 126 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 TEX15Q9BXT5 2789 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 TRBV7-1A0A0A6YYK4 115 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 DIRC3C9JPN6 131 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 PDE6HQ13956 83 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 TMEM136Q6ZRR5 245 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 PRNTQ86SH4 94 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 OR10D4PQ8NGN7 298 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 EEF1AKMT3Q96AZ1 226 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 GRAMD2BQ96HH9 432 aa5.06□□□□□ -1.6
USP47-201ENST00000305481 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
USP47-201ENST00000305481 TRBV6-1A0A0K0K1D8 114 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 BMPR1BO00238 502 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 BUB3O43684 328 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 TGFAP01135 160 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 APOHP02749 345 aaPredicted RBP5.05□□□□□ -1.6
USP47-201ENST00000305481 FABP4P15090 132 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 ATP5G2Q06055 141 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 DEFB112Q30KQ8 113 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 PYY3Q5JQD4 70 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 TMEM75Q8N9X5 138 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 NUP35Q8NFH5 326 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 GNB1LQ9BYB4 327 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 GNB4Q9HAV0 340 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 CR1P17927 2039 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 IZUMO1RA6ND01 250 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 SNURFLB1AK76 121 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 SCGB2A1O75556 95 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 AMBPP02760 352 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 RPL7P18124 248 aaKnown RBP5.05□□□□□ -1.6
USP47-201ENST00000305481 LOXL1Q08397 574 aaPredicted RBP5.05□□□□□ -1.6
USP47-201ENST00000305481 DEFB113Q30KQ7 82 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 MRPL54Q6P161 138 aaKnown RBP5.05□□□□□ -1.6
USP47-201ENST00000305481 TSKUQ8WUA8 353 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 KLK15Q9H2R5 256 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 IGHV3-66A0A0C4DH42 116 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 FAM223BA6NKX1 122 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 NUPR1O60356 82 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 TRBV12-3P01733 135 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 IGHV4-59P01825 116 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 TRGV3P03979 118 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 PSG3Q16557 428 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 GDF5OSQ5U4N7 250 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 KRTAP1-3Q8IUG1 177 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 FAM223AQ8IWN6 122 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 TMEM256Q8N2U0 113 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 GTSF1Q8WW33 167 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 ZC2HC1AQ96GY0 325 aa5.05□□□□□ -1.6
USP47-201ENST00000305481 ZNF492Q9P255 531 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms