RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 NBEAP1P0C6P0 100 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 HLA-DMBP28068 263 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 GCHFRP30047 84 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 KPRPQ5T749 579 aaPredicted RBP7.07□□□□□ -1.28
RFX3-201ENST00000302303 IGFL4Q6B9Z1 124 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 PQLC2Q6ZP29 291 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 Q8N1Y9 231 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 PCNPQ8WW12 178 aaKnown RBP7.07□□□□□ -1.28
RFX3-201ENST00000302303 NARS2Q96I59 477 aaKnown RBP7.07□□□□□ -1.28
RFX3-201ENST00000302303 C20orf173Q96LM9 149 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 SPAG8Q99932 426 aaPredicted RBP7.07□□□□□ -1.28
RFX3-201ENST00000302303 NRN1Q9NPD7 142 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 ZNF331Q9NQX6 463 aaPredicted RBP7.07□□□□□ -1.28
RFX3-201ENST00000302303 SORL1Q92673 2214 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 TRAV2A0A0B4J234 112 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 MAP1LC3B2A6NCE7 125 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 OR7C2O60412 319 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 CD5P06127 495 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 NMBP08949 121 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 CD7P09564 240 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 BMI1P35226 326 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 GALR1P47211 349 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 TAS2R45P59539 299 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 ODF3L2Q3SX64 289 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 KHDC3LQ587J8 217 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 S100A7AQ86SG5 101 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 STXBP6Q8NFX7 210 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 SFT2D1Q8WV19 159 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 MAP1LC3BQ9GZQ8 125 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 ZNF705EA8MWA4 302 aaPredicted RBP7.06□□□□□ -1.28
RFX3-201ENST00000302303 CXorf1O96002 111 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 S100A7P31151 101 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 TFPI2P48307 235 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 RPL11P62913 178 aaKnown RBP7.06□□□□□ -1.28
RFX3-201ENST00000302303 LCN12Q6JVE5 192 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 RBPMS2Q6ZRY4 209 aaKnown RBP7.06□□□□□ -1.28
RFX3-201ENST00000302303 WFDC3Q8IUB2 231 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 RNF24Q9Y225 148 aa7.06□□□□□ -1.28
RFX3-201ENST00000302303 ZNF253O75346 499 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 PRB4P10163 310 aaPredicted RBP7.05□□□□□ -1.28
RFX3-201ENST00000302303 DEFB1P60022 68 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 UBE2L3P68036 154 aaKnown RBP7.05□□□□□ -1.28
RFX3-201ENST00000302303 PMS2P11Q13670 270 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 PDE6HQ13956 83 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 ZNF124Q15973 351 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 GUK1Q16774 197 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 EXOC3-AS1Q8N2X6 119 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 RNF182Q8N6D2 247 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 BLNKQ8WV28 456 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 CITED4Q96RK1 184 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 YTHDF2Q9Y5A9 579 aaKnown RBP7.05□□□□□ -1.28
RFX3-201ENST00000302303 NOTCH1P46531 2555 aa7.05□□□□□ -1.28
RFX3-201ENST00000302303 A0A1B0GV50 99 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 M0R3E3 92 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 ISLRO14498 428 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 IFNA7P01567 189 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 ATF4P18848 351 aaPredicted RBP7.04□□□□□ -1.28
RFX3-201ENST00000302303 RANP62826 216 aaKnown RBP7.04□□□□□ -1.28
RFX3-201ENST00000302303 GUCA2BQ16661 112 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 CCDC28AQ8IWP9 274 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 MAP6D1Q9H9H5 199 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 UBQLN2Q9UHD9 624 aa7.04□□□□□ -1.28
RFX3-201ENST00000302303 FAM74A7A6NL05 159 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 ZNF705FA8MVS1 300 aaPredicted RBP7.03□□□□□ -1.28
RFX3-201ENST00000302303 GGTLC3B5MD39 225 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 PRAC2D3DTV9 90 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 DNASE2O00115 360 aaPredicted RBP7.03□□□□□ -1.28
RFX3-201ENST00000302303 RGS13O14921 159 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 ZNF688P0C7X2 276 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 PSMB3P49720 205 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 MEOX2P50222 304 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 BLOC1S1P78537 153 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 GDF5OSQ5U4N7 250 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 C16orf92Q96LL3 132 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 PRR25Q96S07 402 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 GPR61Q9BZJ8 451 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 Q9H3A6 140 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 TMEM167BQ9NRX6 74 aa7.03□□□□□ -1.28
RFX3-201ENST00000302303 A0A1W2PRE2 83 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 OR4C46A6NHA9 309 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 F6UB75 175 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 DEFB131AP59861 70 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 PAFAH1B2P68402 229 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 ICAM4Q14773 271 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 PSG3Q16557 428 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 ZNF767PQ75MW2 155 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 APRG1Q8IVJ8 170 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 LYPD1Q8N2G4 141 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 SLC50A1Q9BRV3 221 aa7.02□□□□□ -1.29
RFX3-201ENST00000302303 PGPA6NDG6 321 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 PAGE4O60829 102 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 ATP5G3P48201 142 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 UBE2G2P60604 165 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 SUMO1P63165 101 aaKnown RBP7.01□□□□□ -1.29
RFX3-201ENST00000302303 PSMG4Q5JS54 123 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 LRRC20Q8TCA0 184 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms