RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 EPPK1P58107 5090 aaKnown RBP11.39□□□□□ -0.59
UBXN1-202ENST00000301935 TRAV5A0A0B4J249 113 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 TRAV25A0A0B4J276 109 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
UBXN1-202ENST00000301935 NMBP08949 121 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 ATF4P18848 351 aaPredicted RBP11.39□□□□□ -0.59
UBXN1-202ENST00000301935 GCHFRP30047 84 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
UBXN1-202ENST00000301935 PDE6HQ13956 83 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 MORN5Q5VZ52 161 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 LEMD1Q68G75 181 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 DYNLRB2Q8TF09 96 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 HRH4Q9H3N8 390 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 CLEC5AQ9NY25 188 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 ARL2-SNX15V9GYD0 113 aa11.39□□□□□ -0.59
UBXN1-202ENST00000301935 A0A087X0K7 114 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 ZNF785A8K8V0 405 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 MRPS12O15235 138 aaKnown RBP11.38□□□□□ -0.59
UBXN1-202ENST00000301935 ZNF253O75346 499 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 IFNA1P01562 189 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 NBEAP1P0C6P0 100 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 GP9P14770 177 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 UBE2L3P68036 154 aaKnown RBP11.38□□□□□ -0.59
UBXN1-202ENST00000301935 PAFAH1B2P68402 229 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 CASC10Q5T4H9 136 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 SSX7Q7RTT5 188 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 NKX6-2Q9C056 277 aaPredicted RBP11.38□□□□□ -0.59
UBXN1-202ENST00000301935 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
UBXN1-202ENST00000301935 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 HMGB3O15347 200 aaKnown RBP11.37□□□□□ -0.59
UBXN1-202ENST00000301935 IGLC2P0DOY2 106 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 DEFB114Q30KQ6 69 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 TCF24Q7RTU0 167 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 LYPD1Q8N2G4 141 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 MUC7Q8TAX7 377 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 TXNDC17Q9BRA2 123 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 SMAD5-AS1Q9Y6J3 95 aa11.37□□□□□ -0.59
UBXN1-202ENST00000301935 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 TRAV2A0A0B4J234 112 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 SAP30O75446 220 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 FGF8P55075 233 aaPredicted RBP11.36□□□□□ -0.59
UBXN1-202ENST00000301935 FAM90A2PQ658T7 463 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 ADAMTSL5Q6ZMM2 481 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 RBPMS2Q6ZRY4 209 aaKnown RBP11.36□□□□□ -0.59
UBXN1-202ENST00000301935 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 FXYD5Q96DB9 178 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 ZNF503Q96F45 646 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 MLXQ9UH92 298 aa11.36□□□□□ -0.59
UBXN1-202ENST00000301935 BIRC6Q9NR09 4857 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 TRBV19A0A075B6N1 114 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 A0A1W2PRE2 83 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 TSPAN4O14817 238 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 PYYP10082 97 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 RPL11P62913 178 aaKnown RBP11.35□□□□□ -0.59
UBXN1-202ENST00000301935 PSG9Q00887 426 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 RCHY1Q96PM5 261 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 SLC50A1Q9BRV3 221 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 NRN1Q9NPD7 142 aa11.35□□□□□ -0.59
UBXN1-202ENST00000301935 OR10J4P0C629 311 aa11.34□□□□□ -0.59
UBXN1-202ENST00000301935 ID1P41134 155 aa11.34□□□□□ -0.59
UBXN1-202ENST00000301935 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
UBXN1-202ENST00000301935 ZNF586Q9NXT0 402 aa11.34□□□□□ -0.59
UBXN1-202ENST00000301935 LYSTQ99698 3801 aa11.34□□□□□ -0.59
UBXN1-202ENST00000301935 STARD9Q9P2P6 4700 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 H3BQ15 152 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 DNASE2O00115 360 aaPredicted RBP11.33□□□□□ -0.6
UBXN1-202ENST00000301935 NDUFS6O75380 124 aaKnown RBP11.33□□□□□ -0.6
UBXN1-202ENST00000301935 IGLV1-51P01701 117 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 SBSPONQ8IVN8 264 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 ARL6IP6Q8N6S5 226 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
UBXN1-202ENST00000301935 TCEAL7Q9BRU2 100 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 TMPRSS5Q9H3S3 457 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 PRELID1Q9Y255 219 aa11.33□□□□□ -0.6
UBXN1-202ENST00000301935 A0A1B0GV50 99 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 ISLRO14498 428 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
UBXN1-202ENST00000301935 EDN2P20800 178 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 CMC4P56277 68 aaPredicted RBP11.32□□□□□ -0.6
UBXN1-202ENST00000301935 CCL20P78556 96 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 CD300EQ496F6 205 aaPredicted RBP11.32□□□□□ -0.6
UBXN1-202ENST00000301935 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 GNG13Q9P2W3 67 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 DNAH1Q9P2D7 4330 aa11.32□□□□□ -0.6
UBXN1-202ENST00000301935 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
UBXN1-202ENST00000301935 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
UBXN1-202ENST00000301935 SNRPD3P62318 126 aaKnown RBP11.31□□□□□ -0.6
UBXN1-202ENST00000301935 C16orf92Q96LL3 132 aa11.31□□□□□ -0.6
UBXN1-202ENST00000301935 FAM210AQ96ND0 272 aa11.31□□□□□ -0.6
UBXN1-202ENST00000301935 ZNF331Q9NQX6 463 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms