RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 PAFAH1B2P68402 229 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 TMEM136Q6ZRR5 245 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 OR4A5Q8NH83 315 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 WFDC12Q8WWY7 111 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 A1L4Q6 167 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 ZNF785A8K8V0 405 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 IGHV3-11P01762 117 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 RNF2Q99496 336 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 MRPL32Q9BYC8 188 aaKnown RBP12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 DOPEY1Q5JWR5 2465 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 NDUFB8O95169 186 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
CHAF1A-201ENST00000301280 IGKV1-17P01599 117 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 HIST1H1EP10412 219 aaKnown RBP12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 TEX45Q8NA69 505 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 C8orf49Q96NF6 230 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 A0A1W2PS18 150 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 TCRAP04437 139 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 IGLC1P0CG04 106 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 SFTPCP11686 197 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 Q0VG73 95 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 STPG4Q8N801 248 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 RNF125Q96EQ8 232 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 GPR82Q96P67 336 aa12.33□□□□□ -0.44
CHAF1A-201ENST00000301280 NPIPB5A8MRT5 1133 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 PAX2Q02962 417 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 CLEC19AQ6UXS0 136 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 RNF182Q8N6D2 247 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 OSTCQ9NRP0 149 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 KAAG1Q9UBP8 84 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 VWC2LB2RUY7 222 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 C19orf84I3L1E1 186 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 FSTL3O95633 263 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 CEACAM3P40198 252 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 GAGE1Q13065 139 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 TMEM183BQ1AE95 376 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 LINC00173Q6ZV60 143 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 BPIFA4PQ86YQ2 179 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 HIVEP2P31629 2446 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 DEFB1P60022 68 aa12.32□□□□□ -0.44
CHAF1A-201ENST00000301280 M0QZK8 103 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 ORM1P02763 201 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 C8orf46Q8TAG6 207 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 ARPC1AQ92747 370 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 SRD5A1P18405 259 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 SPATA45Q537H7 98 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 Q6ZN92 141 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 CT45A10P0DMU9 189 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 HINT1P49773 126 aaPredicted RBP12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 RELQ04864 619 aaPredicted RBP12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 NIT1Q86X76 327 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
CHAF1A-201ENST00000301280 IZUMO1RA6ND01 250 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 SMKR1H3BMG3 65 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 HLA-DRB1P01911 266 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 CLEC3BP05452 202 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 C3orf79P0CE67 100 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 WDR73Q6P4I2 378 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 CHRDL1Q9BU40 450 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 IGF2BP2-AS1Q96M15 143 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 C21orf62Q9NYP8 219 aa12.3□□□□□ -0.44
CHAF1A-201ENST00000301280 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 ARMS2P0C7Q2 107 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 ERCC8Q13216 396 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 THAP8Q8NA92 274 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 AAMDCQ9H7C9 122 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 K7EIM0 57 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 RPP21Q9H633 154 aaKnown RBP12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 FASNP49327 2511 aaKnown RBP12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 SAA4P35542 130 aa12.29□□□□□ -0.44
CHAF1A-201ENST00000301280 A8MWL6 223 aa12.28□□□□□ -0.44
CHAF1A-201ENST00000301280 C15orf32Q32M92 178 aa12.28□□□□□ -0.44
CHAF1A-201ENST00000301280 C18orf32Q8TCD1 76 aa12.28□□□□□ -0.44
CHAF1A-201ENST00000301280 GTSF1Q8WW33 167 aa12.28□□□□□ -0.44
CHAF1A-201ENST00000301280 NCR2O95944 276 aa12.28□□□□□ -0.44
CHAF1A-201ENST00000301280 PRB1P04280 392 aa12.28□□□□□ -0.44
CHAF1A-201ENST00000301280 GLMPQ8WWB7 406 aa12.28□□□□□ -0.44
CHAF1A-201ENST00000301280 ZNF324O75467 553 aaPredicted RBP12.27□□□□□ -0.44
CHAF1A-201ENST00000301280 HIST2H2BDQ6DRA6 164 aa12.27□□□□□ -0.44
CHAF1A-201ENST00000301280 NF1P21359 2839 aa12.27□□□□□ -0.44
CHAF1A-201ENST00000301280 IGLC2P0DOY2 106 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 IGLC3P0DOY3 106 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 CSN1S1P47710 185 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 MFAP4P55083 255 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 TMEM116Q8NCL8 245 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 OR8A1Q8NGG7 326 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 GRAMD2BQ96HH9 432 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 TMEM213A2RRL7 107 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 TCF21O43680 179 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 PRSS3P2Q8NHM4 247 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 ZC2HC1AQ96GY0 325 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 DUX5Q96PT3 197 aa12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 TRGV9Q99603 122 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms