RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TPPP3Q9BW30 176 aa11.37□□□□□ -0.59
SMG8-201ENST00000300917 Q6ZS46 218 aa11.36□□□□□ -0.59
SMG8-201ENST00000300917 NUP35Q8NFH5 326 aa11.36□□□□□ -0.59
SMG8-201ENST00000300917 DAZAP1Q96EP5 407 aaKnown RBP11.36□□□□□ -0.59
SMG8-201ENST00000300917 TMSB15BA0A087X1C1 80 aa11.36□□□□□ -0.59
SMG8-201ENST00000300917 PGLYRP4Q96LB8 373 aa11.36□□□□□ -0.59
SMG8-201ENST00000300917 OTORQ9NRC9 128 aa11.36□□□□□ -0.59
SMG8-201ENST00000300917 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 KRTAP10-9P60411 292 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 C5orf56Q8N8D9 126 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 ZNF331Q9NQX6 463 aaPredicted RBP11.35□□□□□ -0.59
SMG8-201ENST00000300917 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
SMG8-201ENST00000300917 WI2-2373I1.2A0A1W2PRP0 233 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
SMG8-201ENST00000300917 VWC2LB2RUY7 222 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
SMG8-201ENST00000300917 P01737 135 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 BLCAPP62952 87 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 OR2D3Q8NGH3 330 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 ZNF414Q96IQ9 312 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 TEX15Q9BXT5 2789 aa11.35□□□□□ -0.59
SMG8-201ENST00000300917 TRAV30A0A087WSZ9 112 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 SERF1AO75920 110 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 MSMBP08118 114 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 IGLC2P0DOY2 106 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
SMG8-201ENST00000300917 DEFA6Q01524 100 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 SIGLEC15Q6ZMC9 328 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 ZNF843Q8N446 348 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 PIFOQ8TCI5 191 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 PPP1R14DQ9NXH3 145 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 MYO9AB2RTY4 2548 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 MUC21A0A0G2JKD1 596 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 MUC21A0A140T8X8 626 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 SRIP30626 198 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 SRSF1Q07955 248 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMG8-201ENST00000300917 MUC21Q5SSG8 566 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 TMEM136Q6ZRR5 245 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 Q86TA4 180 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 Q8TAT8 98 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 TP53TG3Q9ULZ0 132 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 UBR5O95071 2799 aaPredicted RBP11.34□□□□□ -0.59
SMG8-201ENST00000300917 SMIM27A0A1W2PRY6 76 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 SLAQ13239 276 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 OR5R1Q8NH85 324 aa11.34□□□□□ -0.59
SMG8-201ENST00000300917 FAM110DQ8TAY7 271 aaPredicted RBP11.34□□□□□ -0.59
SMG8-201ENST00000300917 APOHP02749 345 aaPredicted RBP11.33□□□□□ -0.6
SMG8-201ENST00000300917 GDF5OSQ5U4N7 250 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 C8orf49Q96NF6 230 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 RABAC1Q9UI14 185 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 MXRA5Q9NR99 2828 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 TMEM95Q3KNT9 176 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 FMC1Q96HJ9 113 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 SETD2Q9BYW2 2564 aaPredicted RBP11.33□□□□□ -0.6
SMG8-201ENST00000300917 COX6B1P14854 86 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 TMEM18Q96B42 140 aa11.33□□□□□ -0.6
SMG8-201ENST00000300917 IZUMO1RA6ND01 250 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 LTAP01374 205 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 IGLV2-11P01706 119 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 GBGT1Q8N5D6 347 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 RNF182Q8N6D2 247 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 GRAMD2BQ96HH9 432 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 AAMDCQ9H7C9 122 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 ZNF785A8K8V0 405 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 TRGV3P03979 118 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 ZNF502Q8TBZ5 544 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 RCHY1Q96PM5 261 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 MLST8Q9BVC4 326 aa11.32□□□□□ -0.6
SMG8-201ENST00000300917 TRAV41A0A0B4J266 112 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 MRPS12O15235 138 aaKnown RBP11.31□□□□□ -0.6
SMG8-201ENST00000300917 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 TRBV12-3P01733 135 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 GTSF1Q8WW33 167 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 SAMD10Q9BYL1 202 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
SMG8-201ENST00000300917 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 ZNF253O75346 499 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 TGFAP01135 160 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 APCSP02743 223 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 PMCHP20382 165 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 LINC00310P59036 64 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 HIST2H2BCQ6DN03 193 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 PRRC2AP48634 2157 aaKnown RBP11.31□□□□□ -0.6
SMG8-201ENST00000300917 BMPR1BO00238 502 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 FOXA3P55318 350 aaPredicted RBP11.31□□□□□ -0.6
SMG8-201ENST00000300917 MBD6Q96DN6 1003 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 SMAD5-AS1Q9Y6J3 95 aa11.31□□□□□ -0.6
SMG8-201ENST00000300917 RNF223E7ERA6 249 aa11.3□□□□□ -0.6
SMG8-201ENST00000300917 TPPP2P59282 170 aa11.3□□□□□ -0.6
SMG8-201ENST00000300917 COA6Q5JTJ3 125 aaKnown RBP11.3□□□□□ -0.6
SMG8-201ENST00000300917 Q5PR19 223 aa11.3□□□□□ -0.6
SMG8-201ENST00000300917 TSKUQ8WUA8 353 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms