RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 FAM106AQ4KMX7 169 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 FAM24BQ8N5W8 94 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 MYOZ3Q8TDC0 251 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 SFRP2Q96HF1 295 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 FMC1Q96HJ9 113 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 UBE2E2Q96LR5 201 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 IGF2BP2-AS1Q96M15 143 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 LINC00479Q96M42 142 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 A0A087X0K7 114 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 ZNF320A2RRD8 509 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 ZNF785A8K8V0 405 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 K7EQM0 130 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 MEOX2P50222 304 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 UNQ9165/PRO28630Q6UXU0 137 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 GRAMD2BQ96HH9 432 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 ESM1Q9NQ30 184 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 KLF12Q9Y4X4 402 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 SMAD5-AS1Q9Y6J3 95 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 APOHP02749 345 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 FOLR2P14207 255 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 Q6ZSV7 163 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 KLHDC1Q8N7A1 406 aa12.06□□□□□ -0.48
HERPUD1-201ENST00000300302 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 TRAV34A0A0B4J273 112 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 IGHV3-66A0A0C4DH42 116 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 A0A1W2PS18 150 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 K7EN84 100 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 ISLRO14498 428 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 RNASE1P07998 156 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 LGALS1P09382 135 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 S100PP25815 95 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 CSN1S1P47710 185 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 BAGE2Q86Y30 109 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 GPHB5Q86YW7 130 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 SMIM12Q96EX1 92 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 MYO9AB2RTY4 2548 aa12.05□□□□□ -0.48
HERPUD1-201ENST00000300302 IGHV3OR16-13A0A075B7E8 117 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 IGHV3-74A0A0B4J1X5 117 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 ELOBQ15370 118 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 RPEL1Q2QD12 228 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 C16orf54Q6UWD8 224 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 ARL6IP6Q8N6S5 226 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 SONP18583 2426 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 K7EMT4 169 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 GOLT1AQ6ZVE7 132 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 OR10G8Q8NGN5 311 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 SLC50A1Q9BRV3 221 aa12.04□□□□□ -0.48
HERPUD1-201ENST00000300302 ACANP16112 2415 aa12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 SERTM2A0A1B0GWG4 89 aa12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 GCGP01275 180 aa12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 IGLV2-8P01709 118 aa12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 HILS1P60008 231 aa12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 ERVFC1-1P60608 527 aa12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 ZNF331Q9NQX6 463 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-201ENST00000300302 DIRC3C9JPN6 131 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 FOSL1P15407 271 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 RAB5AP20339 215 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 OR5I1Q13606 314 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 KCNIP4Q6PIL6 250 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 TMEM75Q8N9X5 138 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 GLMPQ8WWB7 406 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.48
HERPUD1-201ENST00000300302 TRBV6-1A0A0K0K1D8 114 aa12.02□□□□□ -0.49
HERPUD1-201ENST00000300302 LTAP01374 205 aa12.02□□□□□ -0.49
HERPUD1-201ENST00000300302 FLI1Q01543 452 aaPredicted RBP12.02□□□□□ -0.49
HERPUD1-201ENST00000300302 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.02□□□□□ -0.49
HERPUD1-201ENST00000300302 IMMP2LQ96T52 175 aa12.02□□□□□ -0.49
HERPUD1-201ENST00000300302 IGHV7-4-1A0A0J9YVY3 117 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 M0R3E3 92 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 BMI1P35226 326 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 CDX1P47902 265 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 NHLRC2Q8NBF2 726 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 SGK494Q96LW2 274 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 BIN3Q9NQY0 253 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 BAHCC1Q9P281 2608 aa12.01□□□□□ -0.49
HERPUD1-201ENST00000300302 INAFM1C9JVW0 142 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 PFN1P07737 140 aaKnown RBP12□□□□□ -0.49
HERPUD1-201ENST00000300302 PSG3Q16557 428 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 TM4SF20Q53R12 229 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 IBA57Q5T440 356 aaKnown RBP12□□□□□ -0.49
HERPUD1-201ENST00000300302 MLXQ9UH92 298 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 Q86TA4 180 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 C16orf95Q9H693 158 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 CLEC5AQ9NY25 188 aa12□□□□□ -0.49
HERPUD1-201ENST00000300302 IGHV4OR15-8A0A075B7B6 117 aa11.99□□□□□ -0.49
HERPUD1-201ENST00000300302 A0A087WW49 117 aa11.99□□□□□ -0.49
HERPUD1-201ENST00000300302 FBLL1A6NHQ2 334 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-201ENST00000300302 IGLV2-11P01706 119 aa11.99□□□□□ -0.49
HERPUD1-201ENST00000300302 CXCL1P09341 107 aa11.99□□□□□ -0.49
HERPUD1-201ENST00000300302 C8orf86Q6ZUL3 223 aa11.99□□□□□ -0.49
HERPUD1-201ENST00000300302 PRNTQ86SH4 94 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms