RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 LINC00312Q9Y6C7 94 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 IGHV1-46P01743 117 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 FTH1P19P0C7X4 201 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 CT45A10P0DMU9 189 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 PRB3Q04118 309 aaPredicted RBP10.32□□□□□ -0.76
TVP23A-201ENST00000299866 CHAC1Q9BUX1 264 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 TMEM133Q9H2Q1 129 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 LOC400499M0QZD8 3231 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
TVP23A-201ENST00000299866 CNTFRP26992 372 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 RPL27AP46776 148 aaKnown RBP10.32□□□□□ -0.76
TVP23A-201ENST00000299866 CD300EQ496F6 205 aaPredicted RBP10.32□□□□□ -0.76
TVP23A-201ENST00000299866 ASPMQ8IZT6 3477 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 NCOR1O75376 2440 aa10.32□□□□□ -0.76
TVP23A-201ENST00000299866 MAP1BP46821 2468 aaKnown RBP10.31□□□□□ -0.76
TVP23A-201ENST00000299866 A0A1B0GW15 77 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 TMEM189A5PLL7 270 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 PRSS1P07477 247 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 LINC00574Q9H8X3 128 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 A0A1B0GV72 72 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 K7EQM0 130 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 GLRXP35754 106 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 ETDBQ3ZM63 59 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 TMEM200BQ69YZ2 307 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 RAI1Q7Z5J4 1906 aaPredicted RBP10.31□□□□□ -0.76
TVP23A-201ENST00000299866 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 AMTNQ6UX39 209 aa10.31□□□□□ -0.76
TVP23A-201ENST00000299866 TPRP12270 2363 aaKnown RBP10.3□□□□□ -0.76
TVP23A-201ENST00000299866 BMI1P35226 326 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 TWIST1Q15672 202 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 ARPC1AQ92747 370 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 ATP6V0BQ99437 205 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 PLSCR4Q9NRQ2 329 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 H3BMG7 143 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 CCL11P51671 97 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 RASL11BQ9BPW5 248 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 NGBQ9NPG2 151 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 CFAP47Q6ZTR5 3102 aa10.3□□□□□ -0.76
TVP23A-201ENST00000299866 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 SPAARA0A1B0GVQ0 90 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 DLX1P56177 255 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 WFDC12Q8WWY7 111 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 PRR33A8MZF0 331 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 HOXB4P17483 251 aaPredicted RBP10.29□□□□□ -0.76
TVP23A-201ENST00000299866 FCER1GP30273 86 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 MRGPRG-AS1Q2M3A8 158 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 SPANXB1Q9NS25 103 aaPredicted RBP10.29□□□□□ -0.76
TVP23A-201ENST00000299866 WI2-2373I1.2A0A1W2PRP0 233 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 J3QR89 54 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 LEPP41159 167 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 RAB9AP51151 201 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 TMEM30BQ3MIR4 351 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 Q6AWC8 147 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 CCDC144NLQ6NUI1 221 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 U3KQK5 164 aa10.29□□□□□ -0.76
TVP23A-201ENST00000299866 GATA4P43694 442 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
TVP23A-201ENST00000299866 S4R3C0 116 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 GAS8-AS1O95177 125 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 SCGB1A1P11684 91 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 WT1P19544 449 aaPredicted RBP10.28□□□□□ -0.76
TVP23A-201ENST00000299866 CEACAM3P40198 252 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 SIGLEC15Q6ZMC9 328 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 SCNM1Q9BWG6 230 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 TMEM14CQ9P0S9 112 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 PKDREJQ9NTG1 2253 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 SH2D1AO60880 128 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 EVI2AP22794 236 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 CKS1BP61024 79 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 ATP5G2Q06055 141 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 DKK4Q9UBT3 224 aa10.28□□□□□ -0.76
TVP23A-201ENST00000299866 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
TVP23A-201ENST00000299866 ZNF479Q96JC4 524 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 FOXC2Q99958 501 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 IGLL5B9A064 214 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 LAMTOR5O43504 91 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 FCN3O75636 299 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 IGHG3P01860 377 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 INSL3P51460 131 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 PAX8Q06710 450 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 ZC2HC1BQ5TFG8 222 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 ZNF562Q6V9R5 426 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 TDHQ8IZJ6 230 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 TMEM160Q9NX00 188 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 MSRB1Q9NZV6 116 aa10.27□□□□□ -0.77
TVP23A-201ENST00000299866 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 ODF1Q14990 250 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 CEND1Q8N111 149 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 HHLA3Q9XRX5 114 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 SMPXQ9UHP9 88 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 IGKV2-40A0A087WW87 121 aaPredicted RBP10.26□□□□□ -0.77
TVP23A-201ENST00000299866 PRSS47A8MTI9 375 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 C16orf97H3BN30 126 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms