RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 C1orf43Q9BWL3 253 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 CSTL1Q9H114 145 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 TEN1Q86WV5 123 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 LYPD1Q8N2G4 141 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 EPOPA6NHQ4 379 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 LCTP09848 1927 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 TRAV41A0A0B4J266 112 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 LYNX1G3V0Z9 82 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 LYNX1P0DP58 116 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 COA6Q5JTJ3 125 aaKnown RBP4.58□□□□□ -1.68
CPSF2-201ENST00000298875 V9GYY9 64 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 SMKR1H3BMG3 65 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 TMEM219Q86XT9 240 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 ZNF319Q9P2F9 582 aa4.58□□□□□ -1.68
CPSF2-201ENST00000298875 IGHV2-26A0A0B4J1V2 119 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 KLRD1Q13241 179 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 TREML4Q6UXN2 200 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 PSG1P11464 419 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 Q71RC1 249 aaPredicted RBP4.57□□□□□ -1.68
CPSF2-201ENST00000298875 IGHV1-18A0A0C4DH31 117 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 PMS2P5A8MQ11 134 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 SUMO4Q6EEV6 95 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 TMEM158Q8WZ71 300 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 USF3Q68DE3 2245 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 RPL35AP18077 110 aaKnown RBP4.57□□□□□ -1.68
CPSF2-201ENST00000298875 LINC00271P0C7V0 271 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 C15orf32Q32M92 178 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 TAX1BP3O14907 124 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 C9orf106Q8NAJ2 232 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 LHBP01229 141 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 IGLC2P0DOY2 106 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 IGLC3P0DOY3 106 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 A0A087WX48 190 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 KIR2DL5BA0A0G2JN68 375 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 KIR2DL5BA0A0G2JPC4 375 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 WNT2P09544 360 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 KIR2DL5AQ8N109 375 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 NUP35Q8NFH5 326 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 RMI2Q96E14 147 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 ROS1P08922 2347 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 DEFB121Q5J5C9 76 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 ZCCHC24Q8N2G6 241 aaKnown RBP4.57□□□□□ -1.68
CPSF2-201ENST00000298875 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 RNF114Q9Y508 228 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 GREM1O60565 184 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 C6orf226Q5I0X4 101 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 TIMM21Q9BVV7 248 aa4.57□□□□□ -1.68
CPSF2-201ENST00000298875 LRRK1Q38SD2 2015 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 ZNF876PQ49A33 203 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 LINC00527Q9UJ94 153 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 Q8TAT8 98 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 SRRM4A7MD48 611 aaKnown RBP4.56□□□□□ -1.68
CPSF2-201ENST00000298875 THBDP07204 575 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 DSCR9P59020 149 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 SYNJ2BPP57105 145 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 C20orf173Q96LM9 149 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 PI4KAP42356 2102 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 UNQ6494/PRO21346Q6UXR6 183 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 TRAV40A0A0B4J280 105 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 C9JAW5 83 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 H0YIZ8 118 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 COX8AP10176 69 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 LCN12Q6JVE5 192 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 WIPF2Q8TF74 440 aaPredicted RBP4.56□□□□□ -1.68
CPSF2-201ENST00000298875 LINC00114Q6XXX2 140 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 ZNF114Q8NC26 417 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 E9PQ18 207 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 IL15RAQ13261 267 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 GREB1LQ9C091 1923 aaPredicted RBP4.56□□□□□ -1.68
CPSF2-201ENST00000298875 SHANK1Q9Y566 2161 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 PLA2G5P39877 138 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 SS18Q15532 418 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 MYOFQ9NZM1 2061 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 TRAV13-1A0A0B4J241 112 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 SLC25A16P16260 332 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 TMEM243Q9BU79 118 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 SNHG12Q9BXW3 62 aa4.56□□□□□ -1.68
CPSF2-201ENST00000298875 TMEM256Q8N2U0 113 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 HIGD1BQ9P298 99 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 ACACAQ13085 2346 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 J3QRE1 110 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 CXCL5P42830 114 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 ZNF138P52744 262 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 ZNF329Q86UD4 541 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 TMEM200BQ69YZ2 307 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 COL4A5P29400 1685 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 A0A087WWL8 130 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 BMPERQ8N8U9 685 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 C1orf159Q96HA4 380 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 GFI1Q99684 422 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 RPL36AP83881 106 aaKnown RBP4.55□□□□□ -1.68
CPSF2-201ENST00000298875 TCF15Q12870 199 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 RPL36ALQ969Q0 106 aaKnown RBP4.55□□□□□ -1.68
CPSF2-201ENST00000298875 C3orf79P0CE67 100 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 IGFBPL1Q8WX77 278 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 SPRR3Q9UBC9 169 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 IGKV1-9A0A0C4DH69 117 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 TSSC4Q9Y5U2 329 aaPredicted RBP4.55□□□□□ -1.68
CPSF2-201ENST00000298875 FANCMQ8IYD8 2048 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 Q6ZS49 121 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms