RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 IGHV3-66A0A0C4DH42 116 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 IGLV1-40P01703 118 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 IGHV3-11P01762 117 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 PDE6HQ13956 83 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 ATP6V0BQ99437 205 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 SERTAD4Q9NUC0 356 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 ZNF207O43670 478 aaKnown RBP17.56■□□□□ 0.4
VSTM4-201ENST00000298454 BUB3O43684 328 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 LTAP01374 205 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 APOHP02749 345 aaPredicted RBP17.56■□□□□ 0.4
VSTM4-201ENST00000298454 S100A9P06702 114 aaKnown RBP17.56■□□□□ 0.4
VSTM4-201ENST00000298454 RPEL1Q2QD12 228 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 MLST8Q9BVC4 326 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 VPREB3Q9UKI3 123 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 TEX15Q9BXT5 2789 aa17.56■□□□□ 0.4
VSTM4-201ENST00000298454 SMAD7O15105 426 aaKnown RBP17.55■□□□□ 0.4
VSTM4-201ENST00000298454 IGLV2-11P01706 119 aa17.55■□□□□ 0.4
VSTM4-201ENST00000298454 ARL3P36405 182 aa17.55■□□□□ 0.4
VSTM4-201ENST00000298454 FABP9Q0Z7S8 132 aa17.55■□□□□ 0.4
VSTM4-201ENST00000298454 USMG5Q96IX5 58 aa17.55■□□□□ 0.4
VSTM4-201ENST00000298454 IGHV3OR16-13A0A075B7E8 117 aa17.55■□□□□ 0.4
VSTM4-201ENST00000298454 IGHV3-74A0A0B4J1X5 117 aa17.55■□□□□ 0.4
VSTM4-201ENST00000298454 ZNF705GA8MUZ8 300 aaPredicted RBP17.54■□□□□ 0.4
VSTM4-201ENST00000298454 CA1P00915 261 aaPredicted RBP17.54■□□□□ 0.4
VSTM4-201ENST00000298454 S100A7P31151 101 aa17.54■□□□□ 0.4
VSTM4-201ENST00000298454 IGHV3-49A0A0A0MS15 119 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 HOXA3O43365 443 aaPredicted RBP17.53■□□□□ 0.4
VSTM4-201ENST00000298454 NDUFA6P56556 154 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 Q71RC1 249 aaPredicted RBP17.53■□□□□ 0.4
VSTM4-201ENST00000298454 Q86TA4 180 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 NUDT10Q8NFP7 164 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 SMIM12Q96EX1 92 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 NUDT11Q96G61 164 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 AAMDCQ9H7C9 122 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 UBE2CO00762 179 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 RAB9AP51151 201 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 FAM231DQ6ZW35 169 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 PRNTQ86SH4 94 aa17.53■□□□□ 0.4
VSTM4-201ENST00000298454 DIRC3C9JPN6 131 aa17.52■□□□□ 0.4
VSTM4-201ENST00000298454 AKR1D1P51857 326 aa17.52■□□□□ 0.4
VSTM4-201ENST00000298454 LINC00322Q6ZN03 302 aaPredicted RBP17.52■□□□□ 0.4
VSTM4-201ENST00000298454 BTF3L4Q96K17 158 aa17.52■□□□□ 0.4
VSTM4-201ENST00000298454 METTL26Q96S19 204 aa17.52■□□□□ 0.4
VSTM4-201ENST00000298454 MXRA5Q9NR99 2828 aa17.52■□□□□ 0.4
VSTM4-201ENST00000298454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.52■□□□□ 0.39
VSTM4-201ENST00000298454 TCL1AP56279 114 aa17.52■□□□□ 0.39
VSTM4-201ENST00000298454 PSG9Q00887 426 aa17.52■□□□□ 0.39
VSTM4-201ENST00000298454 ACTL10Q5JWF8 245 aa17.52■□□□□ 0.39
VSTM4-201ENST00000298454 IGFL4Q6B9Z1 124 aa17.52■□□□□ 0.39
VSTM4-201ENST00000298454 IL17RELQ6ZVW7 336 aa17.52■□□□□ 0.39
VSTM4-201ENST00000298454 ASCL2Q99929 193 aa17.52■□□□□ 0.39
VSTM4-201ENST00000298454 ZNF580Q9UK33 172 aa17.52■□□□□ 0.39
VSTM4-201ENST00000298454 ITPR3Q14573 2671 aa17.51■□□□□ 0.39
VSTM4-201ENST00000298454 OR4X2Q8NGF9 303 aa17.51■□□□□ 0.39
VSTM4-201ENST00000298454 PDZD2O15018 2839 aa17.51■□□□□ 0.39
VSTM4-201ENST00000298454 C10orf99Q6UWK7 81 aa17.5■□□□□ 0.39
VSTM4-201ENST00000298454 UNQ9165/PRO28630Q6UXU0 137 aa17.5■□□□□ 0.39
VSTM4-201ENST00000298454 TMEM75Q8N9X5 138 aa17.5■□□□□ 0.39
VSTM4-201ENST00000298454 TMEM190Q8WZ59 177 aa17.5■□□□□ 0.39
VSTM4-201ENST00000298454 GATCO43716 136 aaKnown RBP17.5■□□□□ 0.39
VSTM4-201ENST00000298454 TRAV9-1A0A075B6T8 112 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 SMIM27A0A1W2PRY6 76 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 ZNF785A8K8V0 405 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 SPINK4O60575 86 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 FRMD6-AS1P0C7T7 363 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 HLA-DMBP28068 263 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 TMEM183AQ8IXX5 376 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 A0A0G2JLM5 398 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 SLC35B1P78383 322 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 PSG3Q16557 428 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 PRDM13Q9H4Q3 707 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 U3KQE9 123 aa17.49■□□□□ 0.39
VSTM4-201ENST00000298454 K7EQM0 130 aa17.48■□□□□ 0.39
VSTM4-201ENST00000298454 IGHG4P01861 327 aa17.48■□□□□ 0.39
VSTM4-201ENST00000298454 PSMB8P28062 276 aa17.48■□□□□ 0.39
VSTM4-201ENST00000298454 DUX5Q96PT3 197 aa17.48■□□□□ 0.39
VSTM4-201ENST00000298454 ZNF331Q9NQX6 463 aaPredicted RBP17.48■□□□□ 0.39
VSTM4-201ENST00000298454 PSG8Q9UQ74 426 aa17.48■□□□□ 0.39
VSTM4-201ENST00000298454 TRAPPC1Q9Y5R8 145 aa17.48■□□□□ 0.39
VSTM4-201ENST00000298454 TRBV6-1A0A0K0K1D8 114 aa17.47■□□□□ 0.39
VSTM4-201ENST00000298454 ZNF253O75346 499 aa17.47■□□□□ 0.39
VSTM4-201ENST00000298454 CSN1S1P47710 185 aa17.47■□□□□ 0.39
VSTM4-201ENST00000298454 C1orf194Q5T5A4 169 aa17.47■□□□□ 0.39
VSTM4-201ENST00000298454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.47■□□□□ 0.39
VSTM4-201ENST00000298454 GRAMD2BQ96HH9 432 aa17.47■□□□□ 0.39
VSTM4-201ENST00000298454 CCDC168Q8NDH2 2452 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 A0A087X0K7 114 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 NDUFA4O00483 81 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 PRSS22Q9GZN4 317 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 ZNF702PQ9H963 129 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 C19orf71A6NCJ1 209 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 HOXA5P20719 270 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 CBLN1P23435 193 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 SIGLECL1Q8N7X8 197 aa17.46■□□□□ 0.39
VSTM4-201ENST00000298454 IGKV2-40A0A087WW87 121 aaPredicted RBP17.45■□□□□ 0.38
VSTM4-201ENST00000298454 CHEK1O14757 476 aa17.45■□□□□ 0.38
VSTM4-201ENST00000298454 IGKV2D-40P01614 121 aaPredicted RBP17.45■□□□□ 0.38
VSTM4-201ENST00000298454 ZNF705FA8MVS1 300 aaPredicted RBP17.45■□□□□ 0.38
VSTM4-201ENST00000298454 GFI1BQ5VTD9 330 aa17.45■□□□□ 0.38
VSTM4-201ENST00000298454 ZNF492Q9P255 531 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms