RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SIGLEC15Q6ZMC9 328 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 DTX2Q86UW9 622 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 SOX21Q9Y651 276 aaPredicted RBP11.85□□□□□ -0.51
CCDC116-201ENST00000292779 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 NCBP2LA6PVI3 153 aaKnown RBP11.84□□□□□ -0.51
CCDC116-201ENST00000292779 NDPQ00604 133 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 ASCL2Q99929 193 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 RNF24Q9Y225 148 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 ZNF785A8K8V0 405 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 NPIPB5A8MRT5 1133 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 MRPS12O15235 138 aaKnown RBP11.84□□□□□ -0.51
CCDC116-201ENST00000292779 ZNF562Q6V9R5 426 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 KIR3DL3Q8N743 410 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 ZC2HC1AQ96GY0 325 aa11.84□□□□□ -0.51
CCDC116-201ENST00000292779 MED13LQ71F56 2210 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 TRBV6-1A0A0K0K1D8 114 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 FAM231BA6NCW3 169 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 M0R2Z0 102 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 ZFP36P26651 326 aaKnown RBP11.83□□□□□ -0.52
CCDC116-201ENST00000292779 CTRLP40313 264 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 MFAP4P55083 255 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 FOXA3P55318 350 aaPredicted RBP11.83□□□□□ -0.52
CCDC116-201ENST00000292779 SPATA45Q537H7 98 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 ZNF414Q96IQ9 312 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 FBN2P35556 2912 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
CCDC116-201ENST00000292779 C16orf54Q6UWD8 224 aa11.83□□□□□ -0.52
CCDC116-201ENST00000292779 FAM181BA6NEQ2 426 aa11.82□□□□□ -0.52
CCDC116-201ENST00000292779 CCDC144NLQ6NUI1 221 aa11.82□□□□□ -0.52
CCDC116-201ENST00000292779 C1orf122Q6ZSJ8 110 aa11.82□□□□□ -0.52
CCDC116-201ENST00000292779 LYPD1Q8N2G4 141 aa11.82□□□□□ -0.52
CCDC116-201ENST00000292779 TTC9CQ8N5M4 171 aa11.82□□□□□ -0.52
CCDC116-201ENST00000292779 USP9YO00507 2555 aaPredicted RBP11.82□□□□□ -0.52
CCDC116-201ENST00000292779 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
CCDC116-201ENST00000292779 Q56UQ5 140 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 LCN12Q6JVE5 192 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 EBLN2Q6P2I7 272 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 Q8N6K4 173 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 PSG8Q9UQ74 426 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 HELZ2Q9BYK8 2649 aaKnown RBP11.81□□□□□ -0.52
CCDC116-201ENST00000292779 K7EQM0 130 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 M0QZ24 198 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 M0R3E3 92 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 IGHV3-23P01764 117 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 APOHP02749 345 aaPredicted RBP11.81□□□□□ -0.52
CCDC116-201ENST00000292779 PSG3Q16557 428 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
CCDC116-201ENST00000292779 ZFP30Q9Y2G7 519 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 SPG11Q96JI7 2443 aa11.81□□□□□ -0.52
CCDC116-201ENST00000292779 OVOL3O00110 214 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 CHEK1O14757 476 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 TCAPO15273 167 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 ATOH7Q8N100 152 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 TMEM190Q8WZ59 177 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 C21orf62Q9NYP8 219 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 M0QZK8 103 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 HAX1O00165 279 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 NDUFB8O95169 186 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 TMEM11P17152 192 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 MRPL52Q86TS9 123 aaKnown RBP11.8□□□□□ -0.52
CCDC116-201ENST00000292779 UBTD1Q9HAC8 227 aa11.8□□□□□ -0.52
CCDC116-201ENST00000292779 LOC102724200A0A096LPH7 203 aaPredicted RBP11.79□□□□□ -0.52
CCDC116-201ENST00000292779 SH2D7A6NKC9 451 aaPredicted RBP11.79□□□□□ -0.52
CCDC116-201ENST00000292779 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 EBI3Q14213 229 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 MINOS1Q5TGZ0 78 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 NBPF19A0A087WUL8 3843 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 C2orf70A6NJV1 201 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 BTF3P20290 206 aaKnown RBP11.79□□□□□ -0.52
CCDC116-201ENST00000292779 CRIP1P50238 77 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
CCDC116-201ENST00000292779 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
CCDC116-201ENST00000292779 EGR2P11161 476 aaPredicted RBP11.78□□□□□ -0.52
CCDC116-201ENST00000292779 MAJINQ3KP22 176 aa11.78□□□□□ -0.52
CCDC116-201ENST00000292779 AAMDCQ9H7C9 122 aa11.78□□□□□ -0.52
CCDC116-201ENST00000292779 CLEC5AQ9NY25 188 aa11.78□□□□□ -0.52
CCDC116-201ENST00000292779 THYN1Q9P016 225 aa11.78□□□□□ -0.52
CCDC116-201ENST00000292779 IGHV7-81A0A0B4J1V7 117 aa11.77□□□□□ -0.52
CCDC116-201ENST00000292779 PDE6HQ13956 83 aa11.77□□□□□ -0.52
CCDC116-201ENST00000292779 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.52
CCDC116-201ENST00000292779 C8orf49Q96NF6 230 aa11.77□□□□□ -0.52
CCDC116-201ENST00000292779 NDFIP1Q9BT67 221 aa11.77□□□□□ -0.52
CCDC116-201ENST00000292779 A0A1B0GUT8 65 aa11.77□□□□□ -0.53
CCDC116-201ENST00000292779 ARMS2P0C7Q2 107 aa11.77□□□□□ -0.53
CCDC116-201ENST00000292779 IGLC3P0DOY3 106 aa11.77□□□□□ -0.53
CCDC116-201ENST00000292779 FAM120AOSQ5T036 256 aa11.77□□□□□ -0.53
CCDC116-201ENST00000292779 POLQO75417 2590 aa11.77□□□□□ -0.53
CCDC116-201ENST00000292779 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.76□□□□□ -0.53
CCDC116-201ENST00000292779 SPATA12Q7Z6I5 190 aa11.76□□□□□ -0.53
CCDC116-201ENST00000292779 CHCHD1Q96BP2 118 aaKnown RBP11.76□□□□□ -0.53
CCDC116-201ENST00000292779 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
CCDC116-201ENST00000292779 IGHV1-24A0A0C4DH33 117 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms