RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 A0A087WX48 190 aa11.79□□□□□ -0.52
RAB11FIP1-201ENST00000287263 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
RAB11FIP1-201ENST00000287263 PSME4Q14997 1843 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 PMS2P5A8MQ11 134 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 TMEM258P61165 79 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 BRK1Q8WUW1 75 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 TEX48A0A1B0GUV7 120 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 SH2D1AO60880 128 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 ANKRD29Q8N6D5 301 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 LRRC37AA6NMS7 1700 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 J3QW42 95 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 EFNA4P52798 201 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
RAB11FIP1-201ENST00000287263 C5orf63A6NC05 138 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 K7EMI3 77 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 C18orf32Q8TCD1 76 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 CACNG8Q8WXS5 425 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 YPEL1O60688 119 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 SYNJ2BPP57105 145 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 Q96MF0 132 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 YPEL2Q96QA6 119 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 TIMM21Q9BVV7 248 aa11.77□□□□□ -0.52
RAB11FIP1-201ENST00000287263 IGLV3-19P01714 112 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 VWC2Q2TAL6 325 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 CARD19Q96LW7 228 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 WDR83OSQ9Y284 106 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 TRBV6-7A0A0A0MS04 114 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 GAS1P54826 345 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 HERV-K104P63124 156 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 C14orf178Q8N769 122 aaPredicted RBP11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 FLVCR1-AS1Q8TAF5 88 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 CLPSL1A2RUU4 121 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 EFNA2O43921 213 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 CFHR2P36980 270 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 TEX43Q6ZNM6 134 aa11.77□□□□□ -0.53
RAB11FIP1-201ENST00000287263 F2Z2F3 143 aa11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 CDK2AP2O75956 126 aa11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGHV1-3A0A0C4DH29 117 aa11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 CEND1Q8N111 149 aa11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 ATP5IP56385 69 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 GGNQ86UU5 652 aa11.76□□□□□ -0.53
RAB11FIP1-201ENST00000287263 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGHV1-8P0DP01 117 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 ZNF581Q9P0T4 197 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 NDUFC2O95298 119 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 NTN3O00634 580 aaPredicted RBP11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 ANAPC10Q9UM13 185 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 FER1L5A0AVI2 2057 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGHV1-24A0A0C4DH33 117 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 TMEM213A2RRL7 107 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 TRAV1-1A0A0B4J248 108 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 Q0VG73 95 aa11.75□□□□□ -0.53
RAB11FIP1-201ENST00000287263 A0A087WWL8 130 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 SRRM4A7MD48 611 aaKnown RBP11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 DUTP33316 252 aaKnown RBP11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 LINC00114Q6XXX2 140 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGKV1-12A0A0C4DH73 117 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGKV1D-12P01611 117 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 COX8AP10176 69 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 ARMS2P0C7Q2 107 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 DOCK9Q9BZ29 2069 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 B4DSR2 109 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 OR11H6Q8NGC7 330 aa11.74□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGHV3-16A0A0C4DH30 117 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 MYMXA0A1B0GTQ4 84 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 PSPNO60542 156 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 PVRIGQ6DKI7 326 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 RNF144BQ7Z419 303 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 A0A0U1RQV1 116 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 ERCC8Q13216 396 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 DUX4L9Q6RFH8 374 aaPredicted RBP11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 SLC50A1Q9BRV3 221 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 TRGV11A0A075B6L2 103 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 PRSS29PA6NIE9 313 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGKV1-27A0A075B6S5 117 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
RAB11FIP1-201ENST00000287263 MRPS18CQ9Y3D5 142 aaKnown RBP11.72□□□□□ -0.53
RAB11FIP1-201ENST00000287263 POLEQ07864 2286 aa11.72□□□□□ -0.53
RAB11FIP1-201ENST00000287263 IGLV3-12A0A075B6K2 115 aa11.72□□□□□ -0.53
RAB11FIP1-201ENST00000287263 A0A096LPF7 62 aa11.72□□□□□ -0.53
RAB11FIP1-201ENST00000287263 J3KT08 172 aa11.72□□□□□ -0.53
RAB11FIP1-201ENST00000287263 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
RAB11FIP1-201ENST00000287263 AHCTF1Q8WYP5 2266 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms