RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 ELANEP08246 267 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
ACER3-201ENST00000278544 TMEM86BQ8N661 226 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 SEC11CQ9BY50 192 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 PLP1P60201 277 aa10.16□□□□□ -0.78
ACER3-201ENST00000278544 SSTP61278 116 aa10.16□□□□□ -0.78
ACER3-201ENST00000278544 GAR1Q9NY12 217 aaKnown RBP10.16□□□□□ -0.78
ACER3-201ENST00000278544 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
ACER3-201ENST00000278544 FAM106AQ4KMX7 169 aa10.16□□□□□ -0.78
ACER3-201ENST00000278544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.16□□□□□ -0.78
ACER3-201ENST00000278544 CMTM2Q8TAZ6 248 aa10.16□□□□□ -0.78
ACER3-201ENST00000278544 TSPAN9O75954 239 aa10.16□□□□□ -0.78
ACER3-201ENST00000278544 LGALS1P09382 135 aaKnown RBP10.16□□□□□ -0.78
ACER3-201ENST00000278544 SVBPQ8N300 66 aa10.16□□□□□ -0.78
ACER3-201ENST00000278544 NKX6-2Q9C056 277 aaPredicted RBP10.16□□□□□ -0.78
ACER3-201ENST00000278544 IGKV2-40A0A087WW87 121 aaPredicted RBP10.15□□□□□ -0.78
ACER3-201ENST00000278544 ISLRO14498 428 aa10.15□□□□□ -0.78
ACER3-201ENST00000278544 IGKV2D-40P01614 121 aaPredicted RBP10.15□□□□□ -0.78
ACER3-201ENST00000278544 HIST1H1EP10412 219 aaKnown RBP10.15□□□□□ -0.78
ACER3-201ENST00000278544 CLRN3Q8NCR9 226 aa10.15□□□□□ -0.78
ACER3-201ENST00000278544 GLMPQ8WWB7 406 aa10.15□□□□□ -0.78
ACER3-201ENST00000278544 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
ACER3-201ENST00000278544 UBE2E2Q96LR5 201 aa10.15□□□□□ -0.78
ACER3-201ENST00000278544 H3BUA1 57 aa10.15□□□□□ -0.79
ACER3-201ENST00000278544 PRR31Q5SQ13 230 aa10.15□□□□□ -0.79
ACER3-201ENST00000278544 Q8TAT8 98 aa10.15□□□□□ -0.79
ACER3-201ENST00000278544 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 C7orf77A4D0Y5 90 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 HELTA6NFD8 242 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 RPL7P18124 248 aaKnown RBP10.14□□□□□ -0.79
ACER3-201ENST00000278544 OR1N2Q8NGR9 330 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 IGKV3-20P01619 116 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 CD33P20138 364 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 KRTAP10-3P60369 221 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 PRNTQ86SH4 94 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 Q8N2B8 174 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
ACER3-201ENST00000278544 DAZ1Q9NQZ3 744 aaKnown RBP10.14□□□□□ -0.79
ACER3-201ENST00000278544 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 F6UB75 175 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 NDUFA4O00483 81 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 NOTCH1P46531 2555 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 ERCC8Q13216 396 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 TMEM241Q24JQ0 296 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 OCC1Q8TAD7 63 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 RAX2Q96IS3 184 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 C16orf92Q96LL3 132 aa10.13□□□□□ -0.79
ACER3-201ENST00000278544 TMEM213A2RRL7 107 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 FOSL1P15407 271 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 JMJD8Q96S16 334 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 TMEM160Q9NX00 188 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 PEX7O00628 323 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 PDE6DO43924 150 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 GALR1P47211 349 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 TCF24Q7RTU0 167 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 TVP23CQ96ET8 276 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 EPDR1Q9UM22 224 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 NBEAL2Q6ZNJ1 2754 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 A0A1W2PRE2 83 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 CLDN34H7C241 214 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 MRPS12O15235 138 aaKnown RBP10.12□□□□□ -0.79
ACER3-201ENST00000278544 SNAPINO95295 136 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 UBE2G1P62253 170 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
ACER3-201ENST00000278544 PKD1L1Q8TDX9 2849 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 SPINK4O60575 86 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 CA1P00915 261 aaPredicted RBP10.11□□□□□ -0.79
ACER3-201ENST00000278544 RNASE7Q9H1E1 156 aaKnown RBP10.11□□□□□ -0.79
ACER3-201ENST00000278544 LINC01619G3V211 115 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 FOLR2P14207 255 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
ACER3-201ENST00000278544 GNG4P50150 75 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 RPL23P62829 140 aaKnown RBP10.11□□□□□ -0.79
ACER3-201ENST00000278544 CARHSP1Q9Y2V2 147 aaKnown RBP10.11□□□□□ -0.79
ACER3-201ENST00000278544 IGHV7-4-1A0A0J9YVY3 117 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 CCL24O00175 119 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 ZNF688P0C7X2 276 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 RNF212Q495C1 297 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.11□□□□□ -0.79
ACER3-201ENST00000278544 CHEK1O14757 476 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 FAM209BQ5JX69 171 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 VGLL1Q99990 258 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 TMEM250H0YL14 139 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 CBLN1P23435 193 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 CNN1P51911 297 aaKnown RBP10.1□□□□□ -0.79
ACER3-201ENST00000278544 SDF2L1Q9HCN8 221 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 SMPXQ9UHP9 88 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 DNASE2O00115 360 aaPredicted RBP10.1□□□□□ -0.79
ACER3-201ENST00000278544 TCRAP04437 139 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 TCL1AP56279 114 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 PROK1P58294 105 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 FAM24BQ8N5W8 94 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 SPATA3Q8NHX4 192 aa10.1□□□□□ -0.79
ACER3-201ENST00000278544 F6UZH7 168 aa10.09□□□□□ -0.79
ACER3-201ENST00000278544 K7EN84 100 aa10.09□□□□□ -0.79
ACER3-201ENST00000278544 ZNF124Q15973 351 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms