RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 A0A096LNJ9 63 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 A0A0G2JLM5 398 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 CRIP1P50238 77 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 RPL24P83731 157 aaKnown RBP10.25□□□□□ -0.77
COL8A1-202ENST00000273342 PLGLAQ15195 96 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 KLF17Q5JT82 389 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-202ENST00000273342 TIMM23BQ5SRD1 257 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 SIGLEC8Q9NYZ4 499 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 SOX21Q9Y651 276 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-202ENST00000273342 IGHV3OR16-8A0A075B7F1 116 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 RIGQ13278 110 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 CT83Q5H943 113 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 IGFL4Q6B9Z1 124 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 TRAV17A0A0B4J275 112 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 GATA4P43694 442 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 MRGPRG-AS1Q2M3A8 158 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 LYZL1Q6UWQ5 148 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 GFRA4Q9GZZ7 299 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 OR2K2Q8NGT1 345 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 TRGV9Q99603 122 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 RASL11BQ9BPW5 248 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 DKK2Q9UBU2 259 aa10.24□□□□□ -0.77
COL8A1-202ENST00000273342 K7EM74 188 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 FGF6P10767 208 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 COX7A1P24310 79 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 CD40P25942 277 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 GTF2H5Q6ZYL4 71 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 OR1N2Q8NGR9 330 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 OTORQ9NRC9 128 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 PSG8Q9UQ74 426 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 DCHS2Q6V1P9 2916 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 A1L4Q6 167 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 NDUFB3O43676 98 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 FCGR2BP31994 310 aaPredicted RBP10.23□□□□□ -0.77
COL8A1-202ENST00000273342 MEF2CQ06413 473 aaPredicted RBP10.23□□□□□ -0.77
COL8A1-202ENST00000273342 OR4A5Q8NH83 315 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 MUC6Q6W4X9 2439 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 C9orf118A6NHY6 69 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 NPIPB6E9PJ23 425 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 K7ERJ3 54 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 OVOL3O00110 214 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 FTH1P19P0C7X4 201 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 GCSHP23434 173 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 CTSZQ9UBR2 303 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 SPCS1Q9Y6A9 102 aa10.23□□□□□ -0.77
COL8A1-202ENST00000273342 ARHGAP32A7KAX9 2087 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 PPIAL4EA0A075B759 164 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 PPIAL4FP0DN26 164 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 PRSS33Q8NF86 280 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 TMEM186Q96B77 213 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 NCOR1P1Q9H4R4 102 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 LINC00574Q9H8X3 128 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 FAM215AQ9Y5M1 114 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 IGHV3-35A0A0C4DH35 117 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 A6NDN8 102 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 CNIH1O95406 144 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 SEC11AP67812 179 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 Q8TAT8 98 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 IGF2RP11717 2491 aa10.22□□□□□ -0.77
COL8A1-202ENST00000273342 LYNX1G3V0Z9 82 aa10.21□□□□□ -0.77
COL8A1-202ENST00000273342 GAS8-AS1O95177 125 aa10.21□□□□□ -0.77
COL8A1-202ENST00000273342 IL4P05112 153 aa10.21□□□□□ -0.77
COL8A1-202ENST00000273342 CRYGCP07315 174 aa10.21□□□□□ -0.77
COL8A1-202ENST00000273342 LYNX1P0DP58 116 aa10.21□□□□□ -0.77
COL8A1-202ENST00000273342 SMIM12Q96EX1 92 aa10.21□□□□□ -0.77
COL8A1-202ENST00000273342 ZNF414Q96IQ9 312 aa10.21□□□□□ -0.77
COL8A1-202ENST00000273342 GNG7O60262 68 aa10.21□□□□□ -0.78
COL8A1-202ENST00000273342 IGHV3-23P01764 117 aa10.21□□□□□ -0.78
COL8A1-202ENST00000273342 CT45A10P0DMU9 189 aa10.21□□□□□ -0.78
COL8A1-202ENST00000273342 TMEM75Q8N9X5 138 aa10.21□□□□□ -0.78
COL8A1-202ENST00000273342 NGBQ9NPG2 151 aa10.21□□□□□ -0.78
COL8A1-202ENST00000273342 INSIG2Q9Y5U4 225 aa10.21□□□□□ -0.78
COL8A1-202ENST00000273342 IGKV2-40A0A087WW87 121 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-202ENST00000273342 IGKV2D-40P01614 121 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-202ENST00000273342 PPIFP30405 207 aaKnown RBP10.2□□□□□ -0.78
COL8A1-202ENST00000273342 TWIST1Q15672 202 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 MSRB1Q9NZV6 116 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 SMAD7O15105 426 aaKnown RBP10.2□□□□□ -0.78
COL8A1-202ENST00000273342 NPYP01303 97 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 CKS2P33552 79 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 PAX2Q02962 417 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 TEX36Q5VZQ5 186 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 UFSP1Q6NVU6 142 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 MTURNQ8N3F0 131 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 SIGLEC9Q9Y336 463 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 TRBV19A0A075B6N1 114 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 IGKV1-17P01599 117 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 ZNF883P0CG24 379 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 EVI2AP22794 236 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 PLP1P60201 277 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 PPP1R27Q86WC6 154 aa10.2□□□□□ -0.78
COL8A1-202ENST00000273342 TMEM189A5PLL7 270 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 NPIPB5A8MRT5 1133 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 C17orf100A8MU93 164 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 K7EP34 96 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 RPS20P60866 119 aaKnown RBP10.19□□□□□ -0.78
COL8A1-202ENST00000273342 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
COL8A1-202ENST00000273342 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms