RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ZNF492Q9P255 531 aa6.57□□□□□ -1.36
LIMD1-201ENST00000273317 RPUSD1Q9UJJ7 312 aaKnown RBP6.57□□□□□ -1.36
LIMD1-201ENST00000273317 PAX4O43316 350 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 RPL36AP83881 106 aaKnown RBP6.56□□□□□ -1.36
LIMD1-201ENST00000273317 RPL36ALQ969Q0 106 aaKnown RBP6.56□□□□□ -1.36
LIMD1-201ENST00000273317 RCHY1Q96PM5 261 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 H3BMM0 161 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 DLEU1O43261 78 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 FAM231BA6NCW3 169 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 RS1O15537 224 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 CYTL1Q9NRR1 136 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 IGKV2-40A0A087WW87 121 aaPredicted RBP6.56□□□□□ -1.36
LIMD1-201ENST00000273317 IGKV2D-40P01614 121 aaPredicted RBP6.56□□□□□ -1.36
LIMD1-201ENST00000273317 SELLP14151 372 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 TRBV20-1A0A075B6N2 111 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 LYZL1Q6UWQ5 148 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 ZNF329Q86UD4 541 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 PAQR4Q8N4S7 273 aaPredicted RBP6.56□□□□□ -1.36
LIMD1-201ENST00000273317 CCL3L1P16619 93 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 FAM201AQ5SY85 155 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 SPATA31B1PQ5VZV4 182 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 EXPH5Q8NEV8 1989 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 CD5LO43866 347 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 TPTE2P1Q5T6R2 138 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 Q86TA4 180 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 CRIM1Q9NZV1 1036 aa6.56□□□□□ -1.36
LIMD1-201ENST00000273317 E9PLN8 166 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 IGHV1-46P01743 117 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 HAPLN4Q86UW8 402 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 GATD1Q8NB37 220 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 IGHV1-8P0DP01 117 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 CFPP27918 469 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 ABCA2Q9BZC7 2435 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 H0YJW9 148 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 CSTL1Q9H114 145 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 IGHV1-18A0A0C4DH31 117 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 ZNF837Q96EG3 531 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-201ENST00000273317 C20orf144Q9BQM9 153 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 PCNX3Q9H6A9 2034 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 C5orf64Q2M2E5 130 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 ADAMTSL5Q6ZMM2 481 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 NOTCH4Q99466 2003 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 SRRM4A7MD48 611 aaKnown RBP6.55□□□□□ -1.36
LIMD1-201ENST00000273317 FLVCR1-AS1Q8TAF5 88 aa6.55□□□□□ -1.36
LIMD1-201ENST00000273317 HIVEP2P31629 2446 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 FXYD7P58549 80 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 Q0VG73 95 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 VSIRQ9H7M9 311 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 A0A1W2PRX2 142 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 LY6G5BQ8NDX9 201 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 IGHV1-3A0A0C4DH29 117 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 SPINK8P0C7L1 97 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 OCIAD2Q56VL3 154 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 VMO1Q7Z5L0 202 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 RPL15P61313 204 aaKnown RBP6.54□□□□□ -1.36
LIMD1-201ENST00000273317 A0A087WX48 190 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 PMS2P5A8MQ11 134 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 MLNRO43193 412 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 GAS1P54826 345 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 EXOC3-AS1Q8N2X6 119 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 PPDPFLQ8WWR9 84 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 PLSCR4Q9NRQ2 329 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 TMEM8BA6NDV4 472 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 PSG1P11464 419 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 SS18Q15532 418 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 SHANK2-AS3Q9BTD1 123 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 SPRR3Q9UBC9 169 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 NCR2O95944 276 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 SRSF2Q01130 221 aaKnown RBP6.54□□□□□ -1.36
LIMD1-201ENST00000273317 NABP1Q96AH0 204 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 IGKV1D-8A0A087WSZ0 117 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 NPIPB5A8MRT5 1133 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 GLRX5Q86SX6 157 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 UBE2WQ96B02 151 aa6.54□□□□□ -1.36
LIMD1-201ENST00000273317 RSPO4Q2I0M5 234 aaPredicted RBP6.53□□□□□ -1.36
LIMD1-201ENST00000273317 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 C1orf43Q9BWL3 253 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 RFNGQ9Y644 331 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 LCN12Q6JVE5 192 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 TRPT1Q86TN4 253 aaKnown RBP6.53□□□□□ -1.36
LIMD1-201ENST00000273317 UBE2DNLQ8IWF7 75 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 NEUROG3Q9Y4Z2 214 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 SONP18583 2426 aaKnown RBP6.53□□□□□ -1.36
LIMD1-201ENST00000273317 MMP23AO75900 390 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 GGNQ86UU5 652 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 OR11H6Q8NGC7 330 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 A0A087X0K7 114 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 RHODO00212 210 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 NCOR1P1Q9H4R4 102 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 TMEM178BH3BS89 294 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 UTF1Q5T230 341 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 SCRT1Q9BWW7 348 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 IGKV1-5P01602 117 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 CSRP1P21291 193 aaKnown RBP6.53□□□□□ -1.36
LIMD1-201ENST00000273317 TRGV1A0A0A0MS02 117 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
LIMD1-201ENST00000273317 ZNF319Q9P2F9 582 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 METRNQ9UJH8 293 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms