RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 CEACAM8P31997 349 aaPredicted RBP8.66□□□□□ -1.02
OTOF-201ENST00000272371 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
OTOF-201ENST00000272371 TFF1P04155 84 aa8.66□□□□□ -1.02
OTOF-201ENST00000272371 PAX8Q06710 450 aa8.66□□□□□ -1.02
OTOF-201ENST00000272371 ATP1A1-AS1Q5TC04 95 aa8.66□□□□□ -1.02
OTOF-201ENST00000272371 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
OTOF-201ENST00000272371 PRB1P04280 392 aa8.66□□□□□ -1.02
OTOF-201ENST00000272371 HOXD3P31249 432 aaPredicted RBP8.66□□□□□ -1.02
OTOF-201ENST00000272371 CRYBA4P53673 196 aa8.66□□□□□ -1.02
OTOF-201ENST00000272371 PRB3Q04118 309 aaPredicted RBP8.66□□□□□ -1.02
OTOF-201ENST00000272371 CHCHD2Q9Y6H1 151 aaPredicted RBP8.66□□□□□ -1.02
OTOF-201ENST00000272371 CCL25O15444 150 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 CELA3BP08861 270 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 PRO1854Q9UHT4 67 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 LGALS9BQ3B8N2 356 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 LGALS9CQ6DKI2 356 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 Q8TAT8 98 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 DOCK4Q8N1I0 1966 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 AKAP6Q13023 2319 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 SYNJ2BPP57105 145 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 C1orf162Q8NEQ5 155 aaPredicted RBP8.65□□□□□ -1.02
OTOF-201ENST00000272371 RPUSD1Q9UJJ7 312 aaKnown RBP8.65□□□□□ -1.02
OTOF-201ENST00000272371 IGKV1-5P01602 117 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 TMEM133Q9H2Q1 129 aa8.65□□□□□ -1.02
OTOF-201ENST00000272371 FNDC1Q4ZHG4 1894 aaPredicted RBP8.65□□□□□ -1.02
OTOF-201ENST00000272371 J3KT08 172 aa8.65□□□□□ -1.03
OTOF-201ENST00000272371 ARMS2P0C7Q2 107 aa8.65□□□□□ -1.03
OTOF-201ENST00000272371 CFHR2P36980 270 aa8.65□□□□□ -1.03
OTOF-201ENST00000272371 TAL2Q16559 108 aa8.65□□□□□ -1.03
OTOF-201ENST00000272371 SIVA1O15304 175 aa8.65□□□□□ -1.03
OTOF-201ENST00000272371 Q86TA4 180 aa8.65□□□□□ -1.03
OTOF-201ENST00000272371 IGLC7A0M8Q6 106 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 NYNRINQ9P2P1 1898 aaKnown RBP8.64□□□□□ -1.03
OTOF-201ENST00000272371 RFPL3SP0C7P2 107 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 LYPD1Q8N2G4 141 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 LIME1Q9H400 295 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 CD24P25063 80 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 RPL36AP83881 106 aaKnown RBP8.64□□□□□ -1.03
OTOF-201ENST00000272371 RPL36ALQ969Q0 106 aaKnown RBP8.64□□□□□ -1.03
OTOF-201ENST00000272371 DSCR8Q96T75 97 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 A0A1W2PR77 199 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 PRSS47A8MTI9 375 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 IGHV1-2P23083 117 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 HLA-DMBP28068 263 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 COLCA1Q6ZS62 124 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 HAPLN4Q86UW8 402 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 SLX1AQ9BQ83 275 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
OTOF-201ENST00000272371 DTX1Q86Y01 620 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 C1orf159Q96HA4 380 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 LYPD3O95274 346 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 TP53TG1Q9Y2A0 90 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 IGHG3P01860 377 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 SRRM4A7MD48 611 aaKnown RBP8.63□□□□□ -1.03
OTOF-201ENST00000272371 Q8N8P6 123 aa8.63□□□□□ -1.03
OTOF-201ENST00000272371 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 C12orf74Q32Q52 190 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 LINC00479Q96M42 142 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 CACNA1IQ9P0X4 2223 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 FNDC10F2Z333 226 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 FREM3P0C091 2139 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 BSPH1Q075Z2 132 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 TMEM75Q8N9X5 138 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 A0A1W2PRX2 142 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 SMIM27A0A1W2PRY6 76 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 TMEM213A2RRL7 107 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 ZNF492Q9P255 531 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 A0A087WWL8 130 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 IGKV1-12A0A0C4DH73 117 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 C15orf62A8K5M9 175 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 IGKV1D-12P01611 117 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 LINC01560Q8TB33 94 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 LRRK1Q38SD2 2015 aa8.62□□□□□ -1.03
OTOF-201ENST00000272371 FGFBP3Q8TAT2 258 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 NTN5Q8WTR8 489 aaPredicted RBP8.61□□□□□ -1.03
OTOF-201ENST00000272371 NEU4Q8WWR8 484 aaPredicted RBP8.61□□□□□ -1.03
OTOF-201ENST00000272371 FAM168AQ92567 244 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 DOPEY2Q9Y3R5 2298 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 PRSS46E5RG02 174 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 RS1O15537 224 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 IGHV2-70DA0A0C4DH43 119 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 FDCSPQ8NFU4 85 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 A0A087WX48 190 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 C17orf100A8MU93 164 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 MYLKQ15746 1914 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 VDAC2P45880 294 aaPredicted RBP8.61□□□□□ -1.03
OTOF-201ENST00000272371 YPEL3P61236 119 aaPredicted RBP8.61□□□□□ -1.03
OTOF-201ENST00000272371 TRPT1Q86TN4 253 aaKnown RBP8.61□□□□□ -1.03
OTOF-201ENST00000272371 TGFBR3LH3BV60 316 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 SS18Q15532 418 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 C10orf55Q5SWW7 151 aa8.61□□□□□ -1.03
OTOF-201ENST00000272371 FAM104BQ5XKR9 115 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms