RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 TMEM52Q8NDY8 209 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 SRSF8Q9BRL6 282 aaKnown RBP11□□□□□ -0.65
PRDM16-201ENST00000270722 PRRC2AP48634 2157 aaKnown RBP11□□□□□ -0.65
PRDM16-201ENST00000270722 TMEM14DPA8MWL7 114 aa11□□□□□ -0.65
PRDM16-201ENST00000270722 PTPRFP10586 1907 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 RPL23P62829 140 aaKnown RBP10.99□□□□□ -0.65
PRDM16-201ENST00000270722 IL17RELQ6ZVW7 336 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 IFITM3Q01628 133 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 INS-IGF2F8WCM5 200 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 TMEM131Q92545 1883 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 EGR4Q05215 589 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 AGMATQ9BSE5 352 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 F6UB75 175 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 MPZP25189 248 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 FAM216BQ8N7L0 139 aa10.99□□□□□ -0.65
PRDM16-201ENST00000270722 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 TRGV1A0A0A0MS02 117 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 VCYO14598 125 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 CCL20P78556 96 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 FBLIM1Q8WUP2 373 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 A0A1W2PR77 199 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 PSG7Q13046 419 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 SPTSSBQ8NFR3 76 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 SRSF2Q01130 221 aaKnown RBP10.98□□□□□ -0.65
PRDM16-201ENST00000270722 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 RFNGQ9Y644 331 aa10.98□□□□□ -0.65
PRDM16-201ENST00000270722 IGKV1D-42A0A075B6H8 117 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 IGKV1-8A0A0C4DH67 115 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 UQCRQO14949 82 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 MYMXA0A1B0GTQ4 84 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 SMIM10L1P0DMW3 83 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 TMEM219Q86XT9 240 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 SMIM10Q96HG1 83 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 D6R8Y8 96 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 LHBP01229 141 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 MUSTN1Q8IVN3 82 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 LTBRP36941 435 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 C15orf32Q32M92 178 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 OR11H6Q8NGC7 330 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 IMMP1LQ96LU5 166 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 SIGLEC8Q9NYZ4 499 aa10.97□□□□□ -0.65
PRDM16-201ENST00000270722 G3V4G9 280 aa10.96□□□□□ -0.65
PRDM16-201ENST00000270722 KLF5Q13887 457 aaPredicted RBP10.96□□□□□ -0.65
PRDM16-201ENST00000270722 CGAP01215 116 aa10.96□□□□□ -0.65
PRDM16-201ENST00000270722 UNQ6494/PRO21346Q6UXR6 183 aa10.96□□□□□ -0.65
PRDM16-201ENST00000270722 NDUFC1O43677 76 aa10.96□□□□□ -0.65
PRDM16-201ENST00000270722 CGB7P0DN87 165 aa10.96□□□□□ -0.65
PRDM16-201ENST00000270722 KLHL30-AS1Q8NEE0 82 aa10.96□□□□□ -0.65
PRDM16-201ENST00000270722 A0A1B0GX51 115 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 CHKB-CPT1BH3BT56 60 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 TBX6O95947 436 aaPredicted RBP10.96□□□□□ -0.66
PRDM16-201ENST00000270722 SAA2-SAA4A0A096LPE2 208 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 SAA2P0DJI9 122 aaPredicted RBP10.96□□□□□ -0.66
PRDM16-201ENST00000270722 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 RLFQ13129 1914 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 F8VVB4 439 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 F8VWA3 439 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 IGHV1-2P23083 117 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 C3orf36Q3SXR2 165 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 WFDC9Q8NEX5 89 aa10.96□□□□□ -0.66
PRDM16-201ENST00000270722 IGHG3P01860 377 aa10.95□□□□□ -0.66
PRDM16-201ENST00000270722 TCF20Q9UGU0 1960 aaKnown RBP10.95□□□□□ -0.66
PRDM16-201ENST00000270722 IGHV2-26A0A0B4J1V2 119 aa10.95□□□□□ -0.66
PRDM16-201ENST00000270722 POLR3KQ9Y2Y1 108 aaPredicted RBP10.95□□□□□ -0.66
PRDM16-201ENST00000270722 TEX48A0A1B0GUV7 120 aa10.95□□□□□ -0.66
PRDM16-201ENST00000270722 IGHV3-48P01763 117 aa10.95□□□□□ -0.66
PRDM16-201ENST00000270722 CCL3L1P16619 93 aa10.95□□□□□ -0.66
PRDM16-201ENST00000270722 CEND1Q8N111 149 aa10.95□□□□□ -0.66
PRDM16-201ENST00000270722 DAZ1Q9NQZ3 744 aaKnown RBP10.95□□□□□ -0.66
PRDM16-201ENST00000270722 MP68P56378 58 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 ZNF138P52744 262 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 NYNRINQ9P2P1 1898 aaKnown RBP10.94□□□□□ -0.66
PRDM16-201ENST00000270722 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 CD200R1LQ6Q8B3 271 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 NUP210Q8TEM1 1887 aaPredicted RBP10.94□□□□□ -0.66
PRDM16-201ENST00000270722 IGHV3-23P01764 117 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 IGLV3-12A0A075B6K2 115 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 K7ERS5 55 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 CGB3P0DN86 165 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 UBE2BP63146 152 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 ATP1A1-AS1Q5TC04 95 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 VMO1Q7Z5L0 202 aa10.94□□□□□ -0.66
PRDM16-201ENST00000270722 J3QLI3 93 aa10.93□□□□□ -0.66
PRDM16-201ENST00000270722 SEC61GP60059 68 aa10.93□□□□□ -0.66
PRDM16-201ENST00000270722 PRR15LQ9BU68 103 aa10.93□□□□□ -0.66
PRDM16-201ENST00000270722 A0A0G2JK05 382 aa10.93□□□□□ -0.66
PRDM16-201ENST00000270722 H3BMG7 143 aa10.93□□□□□ -0.66
PRDM16-201ENST00000270722 MRPL23Q16540 153 aaKnown RBP10.93□□□□□ -0.66
PRDM16-201ENST00000270722 SRSF7Q16629 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRDM16-201ENST00000270722 MORN2Q502X0 79 aa10.93□□□□□ -0.66
PRDM16-201ENST00000270722 RNF138Q8WVD3 245 aa10.93□□□□□ -0.66
PRDM16-201ENST00000270722 COX8AP10176 69 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms