RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ASCL2Q99929 193 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 A0A1B0GXF2 115 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 ZNF324O75467 553 aaPredicted RBP10.14□□□□□ -0.79
CPSF6-201ENST00000266679 IGHV3-23P01764 117 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 TDRG1Q3Y452 100 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 CCDC144NLQ6NUI1 221 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 BCL6BQ8N143 479 aaPredicted RBP10.14□□□□□ -0.79
CPSF6-201ENST00000266679 FANCD2OSQ96PS1 177 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 ZMAT5Q9UDW3 170 aaKnown RBP10.14□□□□□ -0.79
CPSF6-201ENST00000266679 ZFHX3Q15911 3703 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 IGLV11-55A0A075B6I3 123 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 A8MWL6 223 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 EREGO14944 169 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 IGLV2-11P01706 119 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 NTF3P20783 257 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 FCGR2BP31994 310 aaPredicted RBP10.14□□□□□ -0.79
CPSF6-201ENST00000266679 Q56UQ5 140 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 ATP5L2Q7Z4Y8 100 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 FAM19A2Q8N3H0 131 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 OR2D3Q8NGH3 330 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 GTSF1Q8WW33 167 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 PRSS22Q9GZN4 317 aa10.14□□□□□ -0.79
CPSF6-201ENST00000266679 WI2-2373I1.2A0A1W2PRP0 233 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 NPIPB5A8MRT5 1133 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 TMEM11P17152 192 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 MFAP4P55083 255 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 HBBP68871 147 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 PAM16Q9Y3D7 125 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 CT83Q5H943 113 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 ZNF562Q6V9R5 426 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 Q8N6K4 173 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 VAMP8Q9BV40 100 aa10.13□□□□□ -0.79
CPSF6-201ENST00000266679 DIRC3C9JPN6 131 aa10.12□□□□□ -0.79
CPSF6-201ENST00000266679 OR2J3O76001 311 aa10.12□□□□□ -0.79
CPSF6-201ENST00000266679 NDUFB8O95169 186 aa10.12□□□□□ -0.79
CPSF6-201ENST00000266679 NIT1Q86X76 327 aa10.12□□□□□ -0.79
CPSF6-201ENST00000266679 Q8N976 141 aa10.12□□□□□ -0.79
CPSF6-201ENST00000266679 ALKBH7Q9BT30 221 aaPredicted RBP10.12□□□□□ -0.79
CPSF6-201ENST00000266679 SIRPDQ9H106 197 aa10.12□□□□□ -0.79
CPSF6-201ENST00000266679 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
CPSF6-201ENST00000266679 MRPS12O15235 138 aaKnown RBP10.11□□□□□ -0.79
CPSF6-201ENST00000266679 MINOS1Q5TGZ0 78 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
CPSF6-201ENST00000266679 C1orf122Q6ZSJ8 110 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 TTC9CQ8N5M4 171 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 C21orf62Q9NYP8 219 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 MINOS1-NBL1R4GNA1 71 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 OOSP1A8MZH6 123 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
CPSF6-201ENST00000266679 FAM120AOSQ5T036 256 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
CPSF6-201ENST00000266679 TMEM75Q8N9X5 138 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 ZC2HC1AQ96GY0 325 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 ZNF414Q96IQ9 312 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 SETD2Q9BYW2 2564 aaPredicted RBP10.11□□□□□ -0.79
CPSF6-201ENST00000266679 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
CPSF6-201ENST00000266679 OR2T8A6NH00 312 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 NRGNQ92686 78 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 SPOCK3Q9BQ16 436 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 RNF24Q9Y225 148 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 MTORP42345 2549 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 IGHV2-70DA0A0C4DH43 119 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 TRBV6-1A0A0K0K1D8 114 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 NPIPB6E9PJ23 425 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 M0R3E3 92 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 C3orf79P0CE67 100 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 ZNF705AQ6ZN79 300 aaPredicted RBP10.1□□□□□ -0.79
CPSF6-201ENST00000266679 C20orf144Q9BQM9 153 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 PSG8Q9UQ74 426 aa10.1□□□□□ -0.79
CPSF6-201ENST00000266679 SOX21Q9Y651 276 aaPredicted RBP10.1□□□□□ -0.79
CPSF6-201ENST00000266679 IGHV7-81A0A0B4J1V7 117 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 K7EQM0 130 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 HSBP1O75506 76 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 EGR2P11161 476 aaPredicted RBP10.09□□□□□ -0.79
CPSF6-201ENST00000266679 EBI3Q14213 229 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 OR4B1Q8NGF8 309 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 BORCS7Q96B45 105 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
CPSF6-201ENST00000266679 SNHG12Q9BXW3 62 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 MED13LQ71F56 2210 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 WNK2Q9Y3S1 2297 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 ZNF785A8K8V0 405 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 EFNA4P52798 201 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 FOXA3P55318 350 aaPredicted RBP10.09□□□□□ -0.79
CPSF6-201ENST00000266679 PSG3Q16557 428 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 LYPD1Q8N2G4 141 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 Q8N9W7 124 aa10.09□□□□□ -0.79
CPSF6-201ENST00000266679 M0QZ24 198 aa10.08□□□□□ -0.8
CPSF6-201ENST00000266679 M0R2Z0 102 aa10.08□□□□□ -0.8
CPSF6-201ENST00000266679 CHEK1O14757 476 aa10.08□□□□□ -0.8
CPSF6-201ENST00000266679 LBHQ53QV2 105 aaPredicted RBP10.08□□□□□ -0.8
CPSF6-201ENST00000266679 THYN1Q9P016 225 aa10.08□□□□□ -0.8
CPSF6-201ENST00000266679 IGHV3OR16-8A0A075B7F1 116 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms