RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
CHKA-201ENST00000265689 IGHV3OR16-8A0A075B7F1 116 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 SIGLEC15Q6ZMC9 328 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 TMEM256Q8N2U0 113 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 ZNF664Q8N3J9 261 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 ZNF414Q96IQ9 312 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 GPR183P32249 361 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 VN1R17PQ8TDU5 208 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 GRAMD2BQ96HH9 432 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.3
CHKA-201ENST00000265689 NF1P21359 2839 aa13.15□□□□□ -0.31
CHKA-201ENST00000265689 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 ZNF502Q8TBZ5 544 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 MS4A10Q96PG2 267 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 RNF24Q9Y225 148 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 NUPR1O60356 82 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 AMY1AP04745 511 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 MSMBP08118 114 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 TMEM136Q6ZRR5 245 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 Q86TA4 180 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 TXN2Q99757 166 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 NAT8BQ9UHF3 227 aa13.14□□□□□ -0.31
CHKA-201ENST00000265689 RAB4BP61018 213 aa13.13□□□□□ -0.31
CHKA-201ENST00000265689 PRNTQ86SH4 94 aa13.13□□□□□ -0.31
CHKA-201ENST00000265689 MOB4Q9Y3A3 225 aa13.13□□□□□ -0.31
CHKA-201ENST00000265689 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
CHKA-201ENST00000265689 CLEC3BP05452 202 aa13.13□□□□□ -0.31
CHKA-201ENST00000265689 CIARTQ8N365 385 aaPredicted RBP13.13□□□□□ -0.31
CHKA-201ENST00000265689 ASCL2Q99929 193 aa13.13□□□□□ -0.31
CHKA-201ENST00000265689 LINC00527Q9UJ94 153 aa13.13□□□□□ -0.31
CHKA-201ENST00000265689 J3QKU1 62 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 S100A7AQ86SG5 101 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 NUP35Q8NFH5 326 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 MEGF9Q9H1U4 602 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 M0R3E3 92 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 SCGB2A1O75556 95 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
CHKA-201ENST00000265689 KLK9Q2XQG4 91 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 GBGT1Q8N5D6 347 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 KLK9Q9UKQ9 250 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 TP53TG3Q9ULZ0 132 aa13.12□□□□□ -0.31
CHKA-201ENST00000265689 CR1P17927 2039 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 A8MWP6 167 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 PAX1P15863 534 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 CRISP2P16562 243 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 LY6EQ16553 131 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 KIAA1644Q3SXP7 199 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 WDR73Q6P4I2 378 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 LYPD1Q8N2G4 141 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 TSKUQ8WUA8 353 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 CCDC140Q96MF4 163 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 NEU1Q99519 415 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 RABAC1Q9UI14 185 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 C19orf71A6NCJ1 209 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 CLEC19AQ6UXS0 136 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 HIF1ANQ9NWT6 349 aa13.11□□□□□ -0.31
CHKA-201ENST00000265689 TOMM20LQ6UXN7 152 aa13.1□□□□□ -0.31
CHKA-201ENST00000265689 PRSS22Q9GZN4 317 aa13.1□□□□□ -0.31
CHKA-201ENST00000265689 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
CHKA-201ENST00000265689 HIGD1CA8MV81 97 aa13.1□□□□□ -0.31
CHKA-201ENST00000265689 AVPP01185 164 aa13.1□□□□□ -0.31
CHKA-201ENST00000265689 MT-ND6P03923 174 aa13.1□□□□□ -0.31
CHKA-201ENST00000265689 GNB4Q9HAV0 340 aa13.1□□□□□ -0.31
CHKA-201ENST00000265689 ZNF492Q9P255 531 aa13.1□□□□□ -0.31
CHKA-201ENST00000265689 F2Z2F3 143 aa13.09□□□□□ -0.31
CHKA-201ENST00000265689 P01737 135 aa13.09□□□□□ -0.31
CHKA-201ENST00000265689 TCF24Q7RTU0 167 aa13.09□□□□□ -0.31
CHKA-201ENST00000265689 TMEM18Q96B42 140 aa13.09□□□□□ -0.31
CHKA-201ENST00000265689 ZNF331Q9NQX6 463 aaPredicted RBP13.09□□□□□ -0.31
CHKA-201ENST00000265689 SMAD5-AS1Q9Y6J3 95 aa13.09□□□□□ -0.31
CHKA-201ENST00000265689 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
CHKA-201ENST00000265689 LINC00310P59036 64 aa13.09□□□□□ -0.31
CHKA-201ENST00000265689 DAZAP1Q96EP5 407 aaKnown RBP13.09□□□□□ -0.31
CHKA-201ENST00000265689 NOL4LQ96MY1 436 aaPredicted RBP13.09□□□□□ -0.31
CHKA-201ENST00000265689 TRAV41A0A0B4J266 112 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 ZNF785A8K8V0 405 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 B4DSR2 109 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 H3BUX3 64 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 BMPR1BO00238 502 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 RPL7P18124 248 aaKnown RBP13.08□□□□□ -0.32
CHKA-201ENST00000265689 PDE6HQ13956 83 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 COX19Q49B96 90 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 GDF5OSQ5U4N7 250 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 TMEM75Q8N9X5 138 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 PSG8Q9UQ74 426 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 MYO9AB2RTY4 2548 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 EEF1AKMT3Q96AZ1 226 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
CHKA-201ENST00000265689 HLA-DQA1P01909 254 aa13.07□□□□□ -0.32
CHKA-201ENST00000265689 PSG3Q16557 428 aa13.07□□□□□ -0.32
CHKA-201ENST00000265689 GTSF1Q8WW33 167 aa13.07□□□□□ -0.32
CHKA-201ENST00000265689 TRBV6-1A0A0K0K1D8 114 aa13.07□□□□□ -0.32
CHKA-201ENST00000265689 DSCR9P59020 149 aa13.07□□□□□ -0.32
CHKA-201ENST00000265689 IGFL4Q6B9Z1 124 aa13.07□□□□□ -0.32
CHKA-201ENST00000265689 ZC2HC1AQ96GY0 325 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms