RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 ATP6V0E1O15342 81 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 TMEM238C9JI98 176 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 DEFB131AP59861 70 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 PDE6HQ13956 83 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 PYY3Q5JQD4 70 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 SFTA2Q6UW10 78 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 LMO1P25800 156 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 CST9LQ9H4G1 147 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 C14orf178Q8N769 122 aaPredicted RBP13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 OR2K2Q8NGT1 345 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 PHLDA1Q8WV24 401 aaPredicted RBP13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 RASL10AQ92737 203 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 PLEKHB2Q96CS7 222 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 IGHV2-70DA0A0C4DH43 119 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 TMEM95Q3KNT9 176 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 MAPK1IP1LQ8NDC0 245 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 LSM4Q9Y4Z0 139 aaKnown RBP13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 FER1L5A0AVI2 2057 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 A0A0G2JRQ6 117 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 TRAV8-1A0A0A6YYK1 113 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 GGTLC3B5MD39 225 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 FHL1Q13642 323 aa13.63□□□□□ -0.23
CROCCP3-201ENST00000263511 DLEU1O43261 78 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 C11orf68Q9H3H3 251 aaKnown RBP13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 NCOR1P1Q9H4R4 102 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 MLANAQ16655 118 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 NBL1P41271 181 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 ERCC8Q13216 396 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 LINC01619G3V211 115 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 NDUFB8O95169 186 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 DEFB130BP0DP73 79 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 DEFB130AP0DP74 79 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 CR1LQ2VPA4 569 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 Q6ZRM9 215 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 ORAOV1Q8WV07 137 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 C1orf159Q96HA4 380 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 VWA8A3KMH1 1905 aa13.62□□□□□ -0.23
CROCCP3-201ENST00000263511 M0R2P5 195 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 MS4A6AQ9H2W1 248 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 PROK2Q9HC23 129 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 NUP35Q8NFH5 326 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 HS3ST6Q96QI5 342 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 CSTL1Q9H114 145 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 LRRK1Q38SD2 2015 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 J3QLI3 93 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 COL4A6Q14031 1691 aa13.61□□□□□ -0.23
CROCCP3-201ENST00000263511 PAX4O43316 350 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 CFHR2P36980 270 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 ANK1P16157 1881 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 ZNRD1Q9P1U0 126 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 TCF20Q9UGU0 1960 aaKnown RBP13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 YPEL3P61236 119 aaPredicted RBP13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 Q6ZR03 302 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 MPDZO75970 2070 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 HSD52Q0P140 79 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 C6orf226Q5I0X4 101 aa13.6□□□□□ -0.23
CROCCP3-201ENST00000263511 FNDC1Q4ZHG4 1894 aaPredicted RBP13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 C1orf194Q5T5A4 169 aa13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 Q86TA4 180 aa13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 ERG28Q9UKR5 140 aa13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 MEGF9Q9H1U4 602 aa13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 DOCK7Q96N67 2140 aa13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 IGKV1-6A0A0C4DH72 117 aa13.59□□□□□ -0.23
CROCCP3-201ENST00000263511 DEFB104AQ8WTQ1 72 aa13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 WNK2Q9Y3S1 2297 aa13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 LOXP28300 417 aaPredicted RBP13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 KIAA2026Q5HYC2 2103 aa13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 LIME1Q9H400 295 aa13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 A0A087WWL8 130 aa13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 SRSF4Q08170 494 aaKnown RBP13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 ZNF833PQ6ZTB9 187 aa13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 FNDC4Q9H6D8 234 aaPredicted RBP13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.24
CROCCP3-201ENST00000263511 ATXN8Q156A1 80 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 GBF1Q92538 1859 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 ADCYAP1P18509 176 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 PIP4P1Q86T03 277 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 ZNF479Q96JC4 524 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 NDUFA4L2Q9NRX3 87 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 LYL1P12980 280 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 CFPP27918 469 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 SS18Q15532 418 aa13.57□□□□□ -0.24
CROCCP3-201ENST00000263511 ARMS2P0C7Q2 107 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 DOCK8Q8NF50 2099 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 G3V318 75 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 TEX36Q5VZQ5 186 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 PLXNA3P51805 1871 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 RHODO00212 210 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 PRR31Q5SQ13 230 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 FAM90A2PQ658T7 463 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 TRAV13-1A0A0B4J241 112 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 IGLV1-44P01699 117 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 LINC00311Q8N616 119 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 FAM215AQ9Y5M1 114 aa13.56□□□□□ -0.24
CROCCP3-201ENST00000263511 PHF3Q92576 2039 aaKnown RBP13.55□□□□□ -0.24
CROCCP3-201ENST00000263511 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms