RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 IFITM3Q01628 133 aa12.02□□□□□ -0.49
CCDC6-201ENST00000263102 CD200R1LQ6Q8B3 271 aa12.02□□□□□ -0.49
CCDC6-201ENST00000263102 BCL6BQ8N143 479 aaPredicted RBP12.02□□□□□ -0.49
CCDC6-201ENST00000263102 A0A0A6YYD4 124 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 C1orf43Q9BWL3 253 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 KLK5Q9Y337 293 aaPredicted RBP12.01□□□□□ -0.49
CCDC6-201ENST00000263102 WISP1O95388 367 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 AMN1Q8IY45 258 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 IGKV1D-8A0A087WSZ0 117 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 CCL24O00175 119 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 CRYGCP07315 174 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 NEGR1Q7Z3B1 354 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 DSCR8Q96T75 97 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 PIKFYVEQ9Y2I7 2098 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
CCDC6-201ENST00000263102 COL4A5P29400 1685 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 RHODO00212 210 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 HSD52Q0P140 79 aa12.01□□□□□ -0.49
CCDC6-201ENST00000263102 SCN4AP35499 1836 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
CCDC6-201ENST00000263102 FANCD2OSQ96PS1 177 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 ARID1AO14497 2285 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 UBE2AP49459 152 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 IGLV3-32A0A0A0MS00 114 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 HLA-DRB4P13762 266 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 DEFB113Q30KQ7 82 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 HLA-DRB4X5D2U9 266 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 BUB3O43684 328 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 GUSBP1Q15486 140 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 DEFB112Q30KQ8 113 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 GNB1LQ9BYB4 327 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
CCDC6-201ENST00000263102 TRAV26-2A0A0B4J265 109 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 GP9P14770 177 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 GAGE2BQ13066 116 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 C8orf86Q6ZUL3 223 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 C15orf53Q8NAA6 179 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 PCP4P48539 62 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 NDUFAF3Q9BU61 184 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 hDV102S1A0JD36 115 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 INAFM2P0DMQ5 153 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 LINC00114Q6XXX2 140 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 CHAC1Q9BUX1 264 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 WDR83OSQ9Y284 106 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 MYO5AQ9Y4I1 1855 aaKnown RBP11.99□□□□□ -0.49
CCDC6-201ENST00000263102 TMEM170AQ8WVE7 144 aa11.99□□□□□ -0.49
CCDC6-201ENST00000263102 IGKV1-27A0A075B6S5 117 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 LINC00473A8K010 186 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 MTCL1Q9Y4B5 1905 aaKnown RBP11.98□□□□□ -0.49
CCDC6-201ENST00000263102 LY75O60449 1722 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 IGHV4-59P01825 116 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 RSPO3Q9BXY4 272 aaPredicted RBP11.98□□□□□ -0.49
CCDC6-201ENST00000263102 CDKN1BP46527 198 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 ETDCA0A1B0GVM5 59 aa11.98□□□□□ -0.49
CCDC6-201ENST00000263102 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
CCDC6-201ENST00000263102 C9JAW5 83 aa11.97□□□□□ -0.49
CCDC6-201ENST00000263102 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
CCDC6-201ENST00000263102 NHLRC3Q5JS37 347 aa11.97□□□□□ -0.49
CCDC6-201ENST00000263102 NRGNQ92686 78 aa11.97□□□□□ -0.49
CCDC6-201ENST00000263102 NUP214P35658 2090 aaPredicted RBP11.97□□□□□ -0.49
CCDC6-201ENST00000263102 IGLV10-54A0A075B6I4 117 aa11.97□□□□□ -0.49
CCDC6-201ENST00000263102 COL18A1P39060 1754 aa11.97□□□□□ -0.49
CCDC6-201ENST00000263102 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
CCDC6-201ENST00000263102 IGLL5B9A064 214 aa11.96□□□□□ -0.49
CCDC6-201ENST00000263102 NUP35Q8NFH5 326 aa11.96□□□□□ -0.49
CCDC6-201ENST00000263102 HGFACQ04756 655 aa11.96□□□□□ -0.49
CCDC6-201ENST00000263102 C5orf47Q569G3 176 aa11.96□□□□□ -0.49
CCDC6-201ENST00000263102 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.49
CCDC6-201ENST00000263102 TEX36Q5VZQ5 186 aa11.96□□□□□ -0.49
CCDC6-201ENST00000263102 SIGMAR1Q99720 223 aa11.96□□□□□ -0.49
CCDC6-201ENST00000263102 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.5
CCDC6-201ENST00000263102 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.5
CCDC6-201ENST00000263102 SHISA3A0PJX4 238 aa11.96□□□□□ -0.5
CCDC6-201ENST00000263102 ZNF362Q5T0B9 420 aaPredicted RBP11.96□□□□□ -0.5
CCDC6-201ENST00000263102 HS3ST6Q96QI5 342 aa11.96□□□□□ -0.5
CCDC6-201ENST00000263102 PKIGQ9Y2B9 76 aa11.96□□□□□ -0.5
CCDC6-201ENST00000263102 FLVCR1-AS1Q8TAF5 88 aa11.95□□□□□ -0.5
CCDC6-201ENST00000263102 PRSS33Q8NF86 280 aa11.95□□□□□ -0.5
CCDC6-201ENST00000263102 SHANK2-AS3Q9BTD1 123 aa11.95□□□□□ -0.5
CCDC6-201ENST00000263102 TMEM213A2RRL7 107 aa11.95□□□□□ -0.5
CCDC6-201ENST00000263102 DEFB4AO15263 64 aa11.95□□□□□ -0.5
CCDC6-201ENST00000263102 SRSF3P84103 164 aaKnown RBP11.95□□□□□ -0.5
CCDC6-201ENST00000263102 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
CCDC6-201ENST00000263102 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
CCDC6-201ENST00000263102 ICOSQ9Y6W8 199 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 MORN5Q5VZ52 161 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 A0A087X0K7 114 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 NTF4P34130 210 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 SLURP1P55000 103 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 ZFP36P26651 326 aaKnown RBP11.94□□□□□ -0.5
CCDC6-201ENST00000263102 Q86TA4 180 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 AGMATQ9BSE5 352 aa11.94□□□□□ -0.5
CCDC6-201ENST00000263102 A0A087WWC5 75 aa11.93□□□□□ -0.5
CCDC6-201ENST00000263102 IGHG4P01861 327 aa11.93□□□□□ -0.5
CCDC6-201ENST00000263102 GPHB5Q86YW7 130 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms