RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CYB5R2Q6BCY4 276 aa12□□□□□ -0.49
DDX56-201ENST00000258772 PTPRQQ9UMZ3 2332 aa12□□□□□ -0.49
DDX56-201ENST00000258772 OR4C46A6NHA9 309 aa12□□□□□ -0.49
DDX56-201ENST00000258772 LY6HO94772 140 aa12□□□□□ -0.49
DDX56-201ENST00000258772 NDUFA3O95167 84 aa12□□□□□ -0.49
DDX56-201ENST00000258772 PRB4P10163 310 aaPredicted RBP12□□□□□ -0.49
DDX56-201ENST00000258772 IGFBPL1Q8WX77 278 aa12□□□□□ -0.49
DDX56-201ENST00000258772 ARMS2P0C7Q2 107 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 HINT1P49773 126 aaPredicted RBP11.99□□□□□ -0.49
DDX56-201ENST00000258772 ZNF138P52744 262 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 S4R3C0 116 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 MUC6Q6W4X9 2439 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 CEACAM3P40198 252 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 CRIP1P50238 77 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 RIGQ13278 110 aa11.99□□□□□ -0.49
DDX56-201ENST00000258772 M0R3E3 92 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 GNG7O60262 68 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 FOXC1Q12948 553 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 KLRD1Q13241 179 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 FBLN7Q53RD9 439 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
DDX56-201ENST00000258772 FANCD2OSQ96PS1 177 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 RAB1BQ9H0U4 201 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 TRAV30A0A087WSZ9 112 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 C5orf64Q2M2E5 130 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
DDX56-201ENST00000258772 HES1Q14469 280 aa11.97□□□□□ -0.49
DDX56-201ENST00000258772 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
DDX56-201ENST00000258772 IGLV11-55A0A075B6I3 123 aa11.97□□□□□ -0.49
DDX56-201ENST00000258772 CSN3P07498 182 aa11.97□□□□□ -0.49
DDX56-201ENST00000258772 MFAP4P55083 255 aa11.97□□□□□ -0.49
DDX56-201ENST00000258772 PDE6HQ13956 83 aa11.97□□□□□ -0.49
DDX56-201ENST00000258772 NEU4Q8WWR8 484 aaPredicted RBP11.97□□□□□ -0.49
DDX56-201ENST00000258772 ST20Q9HBF5 79 aa11.97□□□□□ -0.49
DDX56-201ENST00000258772 A0A1B0GW15 77 aa11.96□□□□□ -0.49
DDX56-201ENST00000258772 ODF3BA8MYP8 253 aa11.96□□□□□ -0.49
DDX56-201ENST00000258772 M0R1W7 72 aa11.96□□□□□ -0.49
DDX56-201ENST00000258772 CLEC2AQ6UVW9 174 aa11.96□□□□□ -0.49
DDX56-201ENST00000258772 S100A7AQ86SG5 101 aa11.96□□□□□ -0.49
DDX56-201ENST00000258772 TIMD4Q96H15 378 aa11.96□□□□□ -0.49
DDX56-201ENST00000258772 LRBAP50851 2863 aa11.96□□□□□ -0.5
DDX56-201ENST00000258772 LOC105371242A0A075B767 164 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 A0A1W2PRD5 423 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 A0A1W2PRF3 423 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 A0A1W2PRM7 423 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 NPIPB5A8MRT5 1133 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 PRTN3P24158 256 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 ZNF562Q6V9R5 426 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
DDX56-201ENST00000258772 C8orf49Q96NF6 230 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 MAP1LC3CQ9BXW4 147 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 hDV102S1A0JD36 115 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 F8W735 103 aaPredicted RBP11.95□□□□□ -0.5
DDX56-201ENST00000258772 PET117Q6UWS5 81 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 AAMDCQ9H7C9 122 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 SPTA1P02549 2419 aa11.95□□□□□ -0.5
DDX56-201ENST00000258772 CCL21O00585 134 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 Q6AWC8 147 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 HSPB8Q9UJY1 196 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 DCHS2Q6V1P9 2916 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 CT45A10P0DMU9 189 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 CDSNQ15517 529 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 TTC9CQ8N5M4 171 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 TPPP3Q9BW30 176 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 CEP295Q9C0D2 2601 aa11.94□□□□□ -0.5
DDX56-201ENST00000258772 WNK2Q9Y3S1 2297 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 NDPQ00604 133 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 CSN1S1P47710 185 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 ZNF493Q6ZR52 646 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
DDX56-201ENST00000258772 NCBP2LA6PVI3 153 aaKnown RBP11.92□□□□□ -0.5
DDX56-201ENST00000258772 Q6ZVH6 145 aa11.92□□□□□ -0.5
DDX56-201ENST00000258772 DYNAPQ8N1N2 210 aa11.92□□□□□ -0.5
DDX56-201ENST00000258772 MCRIP2Q9BUT9 160 aaKnown RBP11.92□□□□□ -0.5
DDX56-201ENST00000258772 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
DDX56-201ENST00000258772 NBASA2RRP1 2371 aa11.92□□□□□ -0.5
DDX56-201ENST00000258772 SERTM2A0A1B0GWG4 89 aa11.92□□□□□ -0.5
DDX56-201ENST00000258772 TCF21O43680 179 aa11.92□□□□□ -0.5
DDX56-201ENST00000258772 PSG9Q00887 426 aa11.92□□□□□ -0.5
DDX56-201ENST00000258772 TIMM8BQ9Y5J9 83 aaPredicted RBP11.92□□□□□ -0.5
DDX56-201ENST00000258772 COX11Q9Y6N1 276 aa11.92□□□□□ -0.5
DDX56-201ENST00000258772 RELNP78509 3460 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 TMEM189A5PLL7 270 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 HSBP1L1C9JCN9 74 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 H0Y8G0 127 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 PCP4P48539 62 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 LYZL1Q6UWQ5 148 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 PRSS3P2Q8NHM4 247 aa11.91□□□□□ -0.5
DDX56-201ENST00000258772 THYN1Q9P016 225 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms