RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 EVI2AP22794 236 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 ADIPOQQ15848 244 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 OR5AN1Q8NGI8 311 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 SLC25A39Q9BZJ4 359 aaPredicted RBP9.55□□□□□ -0.88
USHBP1-201ENST00000252597 CTSZQ9UBR2 303 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 GAGE12BA1L429 117 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 GNG7O60262 68 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 OR2J3O76001 311 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 PNKDQ8N490 385 aa9.55□□□□□ -0.88
USHBP1-201ENST00000252597 NPIPB5A8MRT5 1133 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 K7EQM0 130 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 PRRG2O14669 202 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 PRSS1P07477 247 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 GCSHP23434 173 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 RIGQ13278 110 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 ZNF833PQ6ZTB9 187 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 TMEM186Q96B77 213 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 MEGF9Q9H1U4 602 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 PTPN13Q12923 2485 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 DCHS2Q6V1P9 2916 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 TM4SF5O14894 197 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 POU2AF1Q16633 256 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 VSTM5A8MXK1 200 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 CKS2P33552 79 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 Q86TA4 180 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 PPP1R27Q86WC6 154 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
USHBP1-201ENST00000252597 PSMB11A5LHX3 300 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 FAM120AOSQ5T036 256 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 ST20Q9HBF5 79 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 K7EP13 123 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 LYZL1Q6UWQ5 148 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 GFRALQ6UXV0 394 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 FAM231DQ6ZW35 169 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 IGHV2-70DA0A0C4DH43 119 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 FAM231BA6NCW3 169 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 TOMM40O96008 361 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 CRYABP02511 175 aaKnown RBP9.53□□□□□ -0.88
USHBP1-201ENST00000252597 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 FAM162BQ5T6X4 162 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 MRPL52Q86TS9 123 aaKnown RBP9.53□□□□□ -0.88
USHBP1-201ENST00000252597 MTURNQ8N3F0 131 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 C8orf46Q8TAG6 207 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 PRELID3AQ96N28 172 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 AAMDCQ9H7C9 122 aa9.53□□□□□ -0.88
USHBP1-201ENST00000252597 PTPRBP23467 1997 aa9.52□□□□□ -0.88
USHBP1-201ENST00000252597 IGLV3-9A0A075B6K5 115 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 TMEM189A5PLL7 270 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 FAM90A27PA6NNH2 459 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 ZNF207O43670 478 aaKnown RBP9.52□□□□□ -0.89
USHBP1-201ENST00000252597 HLA-DMBP28068 263 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 CR1LQ2VPA4 569 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 LINC01560Q8TB33 94 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 KLK15Q9H2R5 256 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 IGKV3-7A0A075B6H7 116 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 TMEM178BH3BS89 294 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 IGHV1-8P0DP01 117 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 KLRD1Q13241 179 aa9.52□□□□□ -0.89
USHBP1-201ENST00000252597 FNDC10F2Z333 226 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 FCN3O75636 299 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 MC5RP33032 325 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 SIGLEC9Q9Y336 463 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 MBD3L4A6NDZ8 208 aaPredicted RBP9.51□□□□□ -0.89
USHBP1-201ENST00000252597 MBD3L3A6NE82 208 aaPredicted RBP9.51□□□□□ -0.89
USHBP1-201ENST00000252597 MBD3L5A6NJ08 208 aaPredicted RBP9.51□□□□□ -0.89
USHBP1-201ENST00000252597 SPRY2O43597 315 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
USHBP1-201ENST00000252597 TMEM97Q5BJF2 176 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 SFTA2Q6UW10 78 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 MBD3L2Q8NHZ7 208 aaPredicted RBP9.51□□□□□ -0.89
USHBP1-201ENST00000252597 NGBQ9NPG2 151 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 UFC1Q9Y3C8 167 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 TRAV30A0A087WSZ9 112 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 GOSR1O95249 250 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 GP9P14770 177 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 KLF5Q13887 457 aaPredicted RBP9.51□□□□□ -0.89
USHBP1-201ENST00000252597 LCNL1Q6ZST4 164 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 PCP2Q8IVA1 136 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 SCNM1Q9BWG6 230 aa9.51□□□□□ -0.89
USHBP1-201ENST00000252597 SORL1Q92673 2214 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 A0A1B0GXF2 115 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 TIMM23O14925 209 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 IGLV2-23P01705 113 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 SAPCD1Q5SSQ6 148 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 WIPF2Q8TF74 440 aaPredicted RBP9.5□□□□□ -0.89
USHBP1-201ENST00000252597 CHCHD1Q96BP2 118 aaKnown RBP9.5□□□□□ -0.89
USHBP1-201ENST00000252597 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 NOTCH2Q04721 2471 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 PRR30Q53SZ7 412 aaPredicted RBP9.5□□□□□ -0.89
USHBP1-201ENST00000252597 RASL11AQ6T310 242 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 CELSR1Q9NYQ6 3014 aa9.5□□□□□ -0.89
USHBP1-201ENST00000252597 PPIAL4CA0A0B4J2A2 164 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 A0A0G2JNJ9 132 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 ITGB1BP1O14713 200 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 LTAP01374 205 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms