RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 BPIFB3P59826 476 aa8.02□□□□□ -1.12
COPB1-201ENST00000249923 OR2J3O76001 311 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 RBX1P62877 108 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 PSG9Q00887 426 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 OCIAD2Q56VL3 154 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 LCNL1Q6ZST4 164 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 BCL6BQ8N143 479 aaPredicted RBP8.02□□□□□ -1.13
COPB1-201ENST00000249923 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 ORAOV1Q8WV07 137 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 TMUB1Q9BVT8 246 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 PRSS22Q9GZN4 317 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.02□□□□□ -1.13
COPB1-201ENST00000249923 BUB1B-PAK6H3BSN5 160 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 VMA21Q3ZAQ7 101 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 TRGV9Q99603 122 aa8.02□□□□□ -1.13
COPB1-201ENST00000249923 C19orf71A6NCJ1 209 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 COX7A1P24310 79 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 HBBP68871 147 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 GRAMD2BQ96HH9 432 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 FBXL15Q9H469 300 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.01□□□□□ -1.13
COPB1-201ENST00000249923 LY6LH3BQJ8 138 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 LTAP01374 205 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 IGLC1P0CG04 106 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 FAM120AOSQ5T036 256 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 GTF2H5Q6ZYL4 71 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 DYNLRB1Q9NP97 96 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 A8MWL6 223 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 I3L2K1 104 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 PRSS1P07477 247 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 NBEAP1P0C6P0 100 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 MC5RP33032 325 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 RPL27AP46776 148 aaKnown RBP8.01□□□□□ -1.13
COPB1-201ENST00000249923 LGALS7P47929 136 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 PLP1P60201 277 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 HES1Q14469 280 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 C12orf54Q6X4T0 127 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 LINC01560Q8TB33 94 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 C17orf77Q96MU5 243 aa8.01□□□□□ -1.13
COPB1-201ENST00000249923 LOC105371242A0A075B767 164 aa8□□□□□ -1.13
COPB1-201ENST00000249923 IGKV1-17P01599 117 aa8□□□□□ -1.13
COPB1-201ENST00000249923 SMAGPQ0VAQ4 97 aa8□□□□□ -1.13
COPB1-201ENST00000249923 ASCL5Q7RTU5 278 aa8□□□□□ -1.13
COPB1-201ENST00000249923 PPP1R27Q86WC6 154 aa8□□□□□ -1.13
COPB1-201ENST00000249923 WFDC12Q8WWY7 111 aa8□□□□□ -1.13
COPB1-201ENST00000249923 IGHV3OR16-13A0A075B7E8 117 aa8□□□□□ -1.13
COPB1-201ENST00000249923 IGHV3-74A0A0B4J1X5 117 aa8□□□□□ -1.13
COPB1-201ENST00000249923 TRAV8-6A0A0B4J262 113 aa8□□□□□ -1.13
COPB1-201ENST00000249923 HLA-DRB1P01911 266 aa8□□□□□ -1.13
COPB1-201ENST00000249923 GPR183P32249 361 aa8□□□□□ -1.13
COPB1-201ENST00000249923 SUB1P53999 127 aaKnown RBP eCLIP8□□□□□ -1.136e-12■■■■■ 37.5
COPB1-201ENST00000249923 ARL6IP6Q8N6S5 226 aa8□□□□□ -1.13
COPB1-201ENST00000249923 Q9H3A6 140 aa8□□□□□ -1.13
COPB1-201ENST00000249923 AP5S1Q9NUS5 200 aa8□□□□□ -1.13
COPB1-201ENST00000249923 CRYBG3Q68DQ2 2970 aa8□□□□□ -1.13
COPB1-201ENST00000249923 SYS1-DBNDD2H3BUS1 97 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 TCRAP04437 139 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 PPIFP30405 207 aaKnown RBP7.99□□□□□ -1.13
COPB1-201ENST00000249923 PERPQ96FX8 193 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 FAM231BA6NCW3 169 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 SMKR1H3BMG3 65 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 HOXB4P17483 251 aaPredicted RBP7.99□□□□□ -1.13
COPB1-201ENST00000249923 SCGB2A2Q13296 93 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 KLF5Q13887 457 aaPredicted RBP7.99□□□□□ -1.13
COPB1-201ENST00000249923 GTSF1LQ9H1H1 148 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 C2orf70A6NJV1 201 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 NCR2O95944 276 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 TOMM40O96008 361 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 APOBEC3AP31941 199 aaPredicted RBP7.99□□□□□ -1.13
COPB1-201ENST00000249923 CACNG7P62955 275 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 PAX2Q02962 417 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 C8orf46Q8TAG6 207 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 GPR82Q96P67 336 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
COPB1-201ENST00000249923 K7EIM0 57 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 IGHV3-23P01764 117 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 ARL3P36405 182 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 IGFL4Q6B9Z1 124 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 KLK15Q9H2R5 256 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 MRPL27Q9P0M9 148 aaKnown RBP7.98□□□□□ -1.13
COPB1-201ENST00000249923 INSIG2Q9Y5U4 225 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 SORL1Q92673 2214 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 RASL11AQ6T310 242 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 SLC25A39Q9BZJ4 359 aaPredicted RBP7.98□□□□□ -1.13
COPB1-201ENST00000249923 IGHV1-24A0A0C4DH33 117 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 CSN1S1P47710 185 aa7.98□□□□□ -1.13
COPB1-201ENST00000249923 KLF17Q5JT82 389 aaPredicted RBP7.98□□□□□ -1.13
COPB1-201ENST00000249923 RPP21Q9H633 154 aaKnown RBP7.98□□□□□ -1.13
COPB1-201ENST00000249923 NPIPB6E9PJ23 425 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 COX19Q49B96 90 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 C16orf54Q6UWD8 224 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 Q86TA4 180 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 PPIAL4CA0A0B4J2A2 164 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 M0R3E3 92 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 TIMM23O14925 209 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 MRPS12O15235 138 aaKnown RBP7.97□□□□□ -1.13
COPB1-201ENST00000249923 PPIAL4GP0DN37 164 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 C5orf17Q8NAS9 161 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 OR1N2Q8NGR9 330 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms