RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CENPWQ5EE01 88 aa10.89□□□□□ -0.67
SDF2-201ENST00000247020 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
SDF2-201ENST00000247020 GRAMD2BQ96HH9 432 aa10.89□□□□□ -0.67
SDF2-201ENST00000247020 SLC50A1Q9BRV3 221 aa10.89□□□□□ -0.67
SDF2-201ENST00000247020 CLEC5AQ9NY25 188 aa10.89□□□□□ -0.67
SDF2-201ENST00000247020 TLN2Q9Y4G6 2542 aa10.89□□□□□ -0.67
SDF2-201ENST00000247020 K7EQM0 130 aa10.88□□□□□ -0.67
SDF2-201ENST00000247020 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
SDF2-201ENST00000247020 UBE2G1P62253 170 aa10.88□□□□□ -0.67
SDF2-201ENST00000247020 OCC1Q8TAD7 63 aa10.88□□□□□ -0.67
SDF2-201ENST00000247020 SMR3AQ99954 134 aa10.88□□□□□ -0.67
SDF2-201ENST00000247020 DAZ1Q9NQZ3 744 aaKnown RBP10.88□□□□□ -0.67
SDF2-201ENST00000247020 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
SDF2-201ENST00000247020 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 FBLL1A6NHQ2 334 aaKnown RBP10.87□□□□□ -0.67
SDF2-201ENST00000247020 H3BTX0 84 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
SDF2-201ENST00000247020 BMI1P35226 326 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 UNQ9165/PRO28630Q6UXU0 137 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 REC114Q7Z4M0 266 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.87□□□□□ -0.67
SDF2-201ENST00000247020 WIPF2Q8TF74 440 aaPredicted RBP10.87□□□□□ -0.67
SDF2-201ENST00000247020 GLMPQ8WWB7 406 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 C17orf77Q96MU5 243 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 UFC1Q9Y3C8 167 aa10.87□□□□□ -0.67
SDF2-201ENST00000247020 LGALS9O00182 355 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 SLC17A3O00476 420 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 CSN1S1P47710 185 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 TMEM75Q8N9X5 138 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 ZNF331Q9NQX6 463 aaPredicted RBP10.86□□□□□ -0.67
SDF2-201ENST00000247020 IGHV7-4-1A0A0J9YVY3 117 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 COLCA2A8K830 154 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 ZNF785A8K8V0 405 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 A8MWP6 167 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 H7BYZ3 331 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 NDUFA7O95182 113 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 GCGP01275 180 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 IGLV2-8P01709 118 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 GNG5P63218 68 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 C4orf3Q8WVX3 66 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 IMMP2LQ96T52 175 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 BIN3Q9NQY0 253 aa10.86□□□□□ -0.67
SDF2-201ENST00000247020 ACANP16112 2415 aa10.85□□□□□ -0.67
SDF2-201ENST00000247020 PGPEP1LA6NFU8 196 aa10.85□□□□□ -0.67
SDF2-201ENST00000247020 ISLRO14498 428 aa10.85□□□□□ -0.67
SDF2-201ENST00000247020 APOHP02749 345 aaPredicted RBP10.85□□□□□ -0.67
SDF2-201ENST00000247020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.85□□□□□ -0.67
SDF2-201ENST00000247020 MRPL53Q96EL3 112 aaKnown RBP10.85□□□□□ -0.67
SDF2-201ENST00000247020 ANK3Q12955 4377 aaKnown RBP10.85□□□□□ -0.67
SDF2-201ENST00000247020 SONP18583 2426 aaKnown RBP10.84□□□□□ -0.67
SDF2-201ENST00000247020 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
SDF2-201ENST00000247020 K7EN84 100 aa10.84□□□□□ -0.67
SDF2-201ENST00000247020 ZNF207O43670 478 aaKnown RBP10.84□□□□□ -0.67
SDF2-201ENST00000247020 LTAP01374 205 aa10.84□□□□□ -0.67
SDF2-201ENST00000247020 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
SDF2-201ENST00000247020 OR5B12Q96R08 314 aa10.84□□□□□ -0.67
SDF2-201ENST00000247020 OSTCQ9NRP0 149 aa10.84□□□□□ -0.67
SDF2-201ENST00000247020 OTOGQ6ZRI0 2925 aa10.84□□□□□ -0.67
SDF2-201ENST00000247020 ZNF320A2RRD8 509 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 HAX1O00165 279 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 S100PP25815 95 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 ELOBQ15370 118 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 SAMD13Q5VXD3 122 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 GOLT1AQ6ZVE7 132 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 OR10G8Q8NGN5 311 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 BTF3L4Q96K17 158 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 LINC00479Q96M42 142 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 SMPXQ9UHP9 88 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 RPH3ALQ9UNE2 315 aa10.83□□□□□ -0.68
SDF2-201ENST00000247020 HIVEP2P31629 2446 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 IGHV4OR15-8A0A075B7B6 117 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 A0A087WW49 117 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 TRAV34A0A0B4J273 112 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 PSG3Q16557 428 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 Q86TA4 180 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 C1QL4Q86Z23 238 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 MLST8Q9BVC4 326 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 RHPN1-AS1Q9BWJ2 59 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 ZFP30Q9Y2G7 519 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 TRBV24-1A0A075B6N3 115 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 RBAKDNA6NC62 111 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 CHEK1O14757 476 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 IGLV2-11P01706 119 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 FOLR2P14207 255 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 FLI1Q01543 452 aaPredicted RBP10.82□□□□□ -0.68
SDF2-201ENST00000247020 TCTEX1D4Q5JR98 221 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 KCNIP4Q6PIL6 250 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 C8orf86Q6ZUL3 223 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 FAM24BQ8N5W8 94 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 LINC01006Q8NI28 216 aa10.82□□□□□ -0.68
SDF2-201ENST00000247020 AURKAIP1Q9NWT8 199 aaPredicted RBP10.82□□□□□ -0.68
SDF2-201ENST00000247020 IGHV3OR16-13A0A075B7E8 117 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 IGHV3-74A0A0B4J1X5 117 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 INAFM1C9JVW0 142 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms