RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 PPBPP02775 128 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 IL4P05112 153 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 PAX1P15863 534 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 GRNP28799 593 aaKnown RBP9.36□□□□□ -0.91
SOX9-201ENST00000245479 GLRXP35754 106 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 ERVK11-1P61568 191 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 IDI2-AS1Q9NZ38 188 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 UPK2O00526 184 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 BRWD1-AS2P59051 145 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 MRPL16Q9NX20 251 aaKnown RBP9.36□□□□□ -0.91
SOX9-201ENST00000245479 TSSC4Q9Y5U2 329 aaPredicted RBP9.36□□□□□ -0.91
SOX9-201ENST00000245479 SPENQ96T58 3664 aaKnown RBP9.35□□□□□ -0.91
SOX9-201ENST00000245479 TRAV8-1A0A0A6YYK1 113 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 A6NJY4 79 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 FAM90A9PA6NNJ1 464 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 SRRM4A7MD48 611 aaKnown RBP9.35□□□□□ -0.91
SOX9-201ENST00000245479 PRCDQ00LT1 54 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 SRRM5B3KS81 715 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 H3BRM9 83 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 TM4SF5O14894 197 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 SEM1Q6ZVN7 128 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 CIARTQ8N365 385 aaPredicted RBP9.35□□□□□ -0.91
SOX9-201ENST00000245479 FBXL15Q9H469 300 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 INSIG2Q9Y5U4 225 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 DSCAMO60469 2012 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 CGB1A6NKQ9 187 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 CCL21O00585 134 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 AZU1P20160 251 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 TP73-AS1Q9UF72 201 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 FAM215AQ9Y5M1 114 aa9.35□□□□□ -0.91
SOX9-201ENST00000245479 OR11H12B2RN74 326 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 CNTFRP26992 372 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 FCGR2BP31994 310 aaPredicted RBP9.34□□□□□ -0.91
SOX9-201ENST00000245479 LINC00173Q6ZV60 143 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 OR11H1Q8NG94 326 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 OR4C13Q8NGP0 309 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 TNFRSF14Q92956 283 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 TPSG1Q9NRR2 321 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 H7C2G1 150 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 J3QW42 95 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 COX8AP10176 69 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 RPL11P62913 178 aaKnown RBP9.34□□□□□ -0.91
SOX9-201ENST00000245479 GAGE13Q4V321 117 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 K7EP34 96 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 OR5AN1Q8NGI8 311 aa9.34□□□□□ -0.91
SOX9-201ENST00000245479 EXPH5Q8NEV8 1989 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 IGHV3-66A0A0C4DH42 116 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 A0A0G2JNJ9 132 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 SMAD7O15105 426 aaKnown RBP9.33□□□□□ -0.92
SOX9-201ENST00000245479 APOMO95445 188 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 TMEM249Q2WGJ8 235 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 TEX45Q8NA69 505 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 Q8TCH9 128 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 Q9UFV3 132 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 RNF114Q9Y508 228 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 TCRBV4S1A1TA0A5B7 111 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 TGFAP01135 160 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 VDAC2P45880 294 aaPredicted RBP9.33□□□□□ -0.92
SOX9-201ENST00000245479 SSBP2P81877 361 aaPredicted RBP9.33□□□□□ -0.92
SOX9-201ENST00000245479 TTC32Q5I0X7 151 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 PRSS57Q6UWY2 283 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 PLSCR4Q9NRQ2 329 aa9.33□□□□□ -0.92
SOX9-201ENST00000245479 OSR1Q8TAX0 266 aaPredicted RBP9.33□□□□□ -0.92
SOX9-201ENST00000245479 FOXA2Q9Y261 457 aaPredicted RBP9.33□□□□□ -0.92
SOX9-201ENST00000245479 NACAE9PAV3 2078 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 D6R8Y8 96 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 CTRLP40313 264 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 RPS20P60866 119 aaKnown RBP9.32□□□□□ -0.92
SOX9-201ENST00000245479 MEF2CQ06413 473 aaPredicted RBP9.32□□□□□ -0.92
SOX9-201ENST00000245479 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 KRTAP27-1Q3LI81 207 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 H0YJW9 148 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 Q6ZSR3 168 aa9.32□□□□□ -0.92
SOX9-201ENST00000245479 IFI27P40305 119 aaPredicted RBP9.31□□□□□ -0.92
SOX9-201ENST00000245479 LY6DQ14210 128 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.31□□□□□ -0.92
SOX9-201ENST00000245479 LINC00527Q9UJ94 153 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 E7EUB6 86 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 LEPP41159 167 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 SLC25A48Q6ZT89 311 aaKnown RBP9.31□□□□□ -0.92
SOX9-201ENST00000245479 GTSCR1Q86UQ5 136 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 ANAPC13Q9BS18 74 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 NCR2O95944 276 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 TCRAP04437 139 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 RPL13AP40429 203 aaKnown RBP9.31□□□□□ -0.92
SOX9-201ENST00000245479 RBPJQ06330 500 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 IGFL4Q6B9Z1 124 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 ZNF329Q86UD4 541 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 EXOC3-AS1Q8N2X6 119 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 OR4A5Q8NH83 315 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 DPF1Q92782 380 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms