RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 SLAQ13239 276 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 TMEM190Q8WZ59 177 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 LMO1P25800 156 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 LYPD6BQ8NI32 183 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 TSSC4Q9Y5U2 329 aaPredicted RBP16.06■□□□□ 0.16
SOX4-201ENST00000244745 LY6G6EA0A0G2JKS1 128 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 ARMS2P0C7Q2 107 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 U3KQA8 63 aa16.06■□□□□ 0.16
SOX4-201ENST00000244745 TMEM238C9JI98 176 aa16.05■□□□□ 0.16
SOX4-201ENST00000244745 UNQ6494/PRO21346Q6UXR6 183 aa16.05■□□□□ 0.16
SOX4-201ENST00000244745 DUSP14O95147 198 aaKnown RBP16.05■□□□□ 0.16
SOX4-201ENST00000244745 COL8A2P25067 703 aa16.05■□□□□ 0.16
SOX4-201ENST00000244745 IGHV1-24A0A0C4DH33 117 aa16.05■□□□□ 0.16
SOX4-201ENST00000244745 TRGV2A0A075B6R0 118 aa16.05■□□□□ 0.16
SOX4-201ENST00000244745 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.05■□□□□ 0.16
SOX4-201ENST00000244745 C8orf49Q96NF6 230 aa16.05■□□□□ 0.16
SOX4-201ENST00000244745 DUX4L9Q6RFH8 374 aaPredicted RBP16.04■□□□□ 0.16
SOX4-201ENST00000244745 LYPD1Q8N2G4 141 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 K7EP34 96 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 IGLV3-1P01715 115 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 ASPHD1Q5U4P2 390 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 Q6ZR03 302 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 PRSS57Q6UWY2 283 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 SNRNP200O75643 2136 aaKnown RBP16.04■□□□□ 0.16
SOX4-201ENST00000244745 SMIM27A0A1W2PRY6 76 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 STHQ8IWL8 128 aa16.04■□□□□ 0.16
SOX4-201ENST00000244745 TANC1Q9C0D5 1861 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 TRGV11A0A075B6L2 103 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 K7EP13 123 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 SPAG8Q99932 426 aaPredicted RBP16.03■□□□□ 0.16
SOX4-201ENST00000244745 SHANK2-AS3Q9BTD1 123 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 PLXNB3Q9ULL4 1909 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 IGHV3-73A0A0B4J1V6 119 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 C2orf82Q6UX34 121 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 IL15RAQ13261 267 aa16.03■□□□□ 0.16
SOX4-201ENST00000244745 TNFRSF6BO95407 300 aa16.02■□□□□ 0.16
SOX4-201ENST00000244745 HEATR5AQ86XA9 2040 aa16.02■□□□□ 0.16
SOX4-201ENST00000244745 TMEM8BA6NDV4 472 aa16.02■□□□□ 0.16
SOX4-201ENST00000244745 RCHY1Q96PM5 261 aa16.02■□□□□ 0.16
SOX4-201ENST00000244745 A0A0U1RRA0 63 aa16.02■□□□□ 0.16
SOX4-201ENST00000244745 C17orf58Q2M2W7 97 aa16.02■□□□□ 0.16
SOX4-201ENST00000244745 NDUFA4L2Q9NRX3 87 aa16.02■□□□□ 0.16
SOX4-201ENST00000244745 TMEM213A2RRL7 107 aa16.02■□□□□ 0.15
SOX4-201ENST00000244745 CFHR2P36980 270 aa16.02■□□□□ 0.15
SOX4-201ENST00000244745 RNF166Q96A37 237 aaPredicted RBP16.02■□□□□ 0.15
SOX4-201ENST00000244745 GGTLC3B5MD39 225 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 MMP23AO75900 390 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 TMEM249Q2WGJ8 235 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 MINOS1Q5TGZ0 78 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 ZNF492Q9P255 531 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 MINOS1-NBL1R4GNA1 71 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 FAM186AA6NE01 2351 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 ZNF562Q6V9R5 426 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 TMEM75Q8N9X5 138 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 LY6HO94772 140 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 C14orf178Q8N769 122 aaPredicted RBP16.01■□□□□ 0.15
SOX4-201ENST00000244745 DPH3P1Q9H4G8 78 aa16.01■□□□□ 0.15
SOX4-201ENST00000244745 AHCTF1Q8WYP5 2266 aa16■□□□□ 0.15
SOX4-201ENST00000244745 TRBV7-1A0A0A6YYK4 115 aa16■□□□□ 0.15
SOX4-201ENST00000244745 PRSS22Q9GZN4 317 aa16■□□□□ 0.15
SOX4-201ENST00000244745 COX8AP10176 69 aa16■□□□□ 0.15
SOX4-201ENST00000244745 M0R1W7 72 aa16■□□□□ 0.15
SOX4-201ENST00000244745 BVES-AS1Q5T3Y7 98 aa16■□□□□ 0.15
SOX4-201ENST00000244745 CSTL1Q9H114 145 aa16■□□□□ 0.15
SOX4-201ENST00000244745 ZNF833PQ6ZTB9 187 aa15.99■□□□□ 0.15
SOX4-201ENST00000244745 SRRM4A7MD48 611 aaKnown RBP15.99■□□□□ 0.15
SOX4-201ENST00000244745 Q6ZVH6 145 aa15.99■□□□□ 0.15
SOX4-201ENST00000244745 KIR2DL5BA0A0G2JN68 375 aa15.99■□□□□ 0.15
SOX4-201ENST00000244745 KIR2DL5BA0A0G2JPC4 375 aa15.99■□□□□ 0.15
SOX4-201ENST00000244745 LINC01549A6NIU2 74 aa15.99■□□□□ 0.15
SOX4-201ENST00000244745 KIR2DL5AQ8N109 375 aa15.99■□□□□ 0.15
SOX4-201ENST00000244745 C9JAW5 83 aa15.98■□□□□ 0.15
SOX4-201ENST00000244745 LY6DQ14210 128 aa15.98■□□□□ 0.15
SOX4-201ENST00000244745 BRD3OSQ6XYD6 125 aa15.98■□□□□ 0.15
SOX4-201ENST00000244745 C15orf65H3BRN8 121 aa15.98■□□□□ 0.15
SOX4-201ENST00000244745 PLEKHB2Q96CS7 222 aa15.98■□□□□ 0.15
SOX4-201ENST00000244745 C9orf139Q6ZV77 190 aa15.97■□□□□ 0.15
SOX4-201ENST00000244745 E7EQL1 145 aa15.97■□□□□ 0.15
SOX4-201ENST00000244745 OOSP1A8MZH6 123 aa15.97■□□□□ 0.15
SOX4-201ENST00000244745 NCOR1P1Q9H4R4 102 aa15.97■□□□□ 0.15
SOX4-201ENST00000244745 ASXL3Q9C0F0 2248 aa15.97■□□□□ 0.15
SOX4-201ENST00000244745 A0A1W2PPM0 123 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 ZNF134P52741 427 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 CFAP161Q6P656 301 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 DENND4CQ5VZ89 1909 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 FCN3O75636 299 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 CDKN1BP46527 198 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 EFNA4P52798 201 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 LINC00477Q96M19 166 aa15.96■□□□□ 0.15
SOX4-201ENST00000244745 K7EN84 100 aa15.96■□□□□ 0.14
SOX4-201ENST00000244745 ZNF876PQ49A33 203 aa15.96■□□□□ 0.14
SOX4-201ENST00000244745 IGLC7A0M8Q6 106 aa15.95■□□□□ 0.14
SOX4-201ENST00000244745 CT83Q5H943 113 aa15.95■□□□□ 0.14
SOX4-201ENST00000244745 C11orf68Q9H3H3 251 aaKnown RBP15.95■□□□□ 0.14
SOX4-201ENST00000244745 CACNA1DQ01668 2161 aa15.95■□□□□ 0.14
SOX4-201ENST00000244745 EDA2RQ9HAV5 297 aa15.94■□□□□ 0.14
SOX4-201ENST00000244745 KIAA1671Q9BY89 1806 aa15.94■□□□□ 0.14
SOX4-201ENST00000244745 F8W1H4 67 aa15.94■□□□□ 0.14
SOX4-201ENST00000244745 ZNF688P0C7X2 276 aa15.94■□□□□ 0.14
SOX4-201ENST00000244745 KLF12Q9Y4X4 402 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms