RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 TUBA4BQ9H853 241 aa17.51■□□□□ 0.39
HOMER3-201ENST00000221222 RPRMQ9NS64 109 aa17.51■□□□□ 0.39
HOMER3-201ENST00000221222 TRAV8-2A0A0B4J237 113 aa17.5■□□□□ 0.39
HOMER3-201ENST00000221222 PYYP10082 97 aa17.5■□□□□ 0.39
HOMER3-201ENST00000221222 HIST1H1EP10412 219 aaKnown RBP17.5■□□□□ 0.39
HOMER3-201ENST00000221222 TPT1P13693 172 aaKnown RBP17.5■□□□□ 0.39
HOMER3-201ENST00000221222 KHDC3LQ587J8 217 aa17.5■□□□□ 0.39
HOMER3-201ENST00000221222 FAM122CQ6P4D5 195 aa17.5■□□□□ 0.39
HOMER3-201ENST00000221222 OR51M1Q9H341 326 aa17.5■□□□□ 0.39
HOMER3-201ENST00000221222 ZNF586Q9NXT0 402 aa17.5■□□□□ 0.39
HOMER3-201ENST00000221222 FRMD6-AS1P0C7T7 363 aa17.49■□□□□ 0.39
HOMER3-201ENST00000221222 ZNF124Q15973 351 aa17.49■□□□□ 0.39
HOMER3-201ENST00000221222 LINC00322Q6ZN03 302 aaPredicted RBP17.49■□□□□ 0.39
HOMER3-201ENST00000221222 SAT2Q96F10 170 aaPredicted RBP17.49■□□□□ 0.39
HOMER3-201ENST00000221222 ZNF503Q96F45 646 aa17.49■□□□□ 0.39
HOMER3-201ENST00000221222 PAXXQ9BUH6 204 aa17.49■□□□□ 0.39
HOMER3-201ENST00000221222 ZNF253O75346 499 aa17.48■□□□□ 0.39
HOMER3-201ENST00000221222 C4BPBP20851 252 aa17.48■□□□□ 0.39
HOMER3-201ENST00000221222 CDC34P49427 236 aaPredicted RBP17.48■□□□□ 0.39
HOMER3-201ENST00000221222 AKR1C8PQ5T2L2 129 aa17.48■□□□□ 0.39
HOMER3-201ENST00000221222 SLC50A1Q9BRV3 221 aa17.48■□□□□ 0.39
HOMER3-201ENST00000221222 ZNF331Q9NQX6 463 aaPredicted RBP17.48■□□□□ 0.39
HOMER3-201ENST00000221222 TRBV19A0A075B6N1 114 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 OR7C2O60412 319 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 SNRPCP09234 159 aaKnown RBP17.47■□□□□ 0.39
HOMER3-201ENST00000221222 SLC51BQ86UW2 128 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 LRRC20Q8TCA0 184 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 RNF141Q8WVD5 230 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 RAB24Q969Q5 203 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 FXYD5Q96DB9 178 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 LINC00052Q96N35 136 aa17.47■□□□□ 0.39
HOMER3-201ENST00000221222 ACTR3CQ9C0K3 210 aaPredicted RBP17.47■□□□□ 0.39
HOMER3-201ENST00000221222 COL7A1Q02388 2944 aa17.46■□□□□ 0.39
HOMER3-201ENST00000221222 RBMY1BA6NDE4 496 aaKnown RBP17.46■□□□□ 0.39
HOMER3-201ENST00000221222 RBMY1EA6NEQ0 496 aaKnown RBP17.46■□□□□ 0.39
HOMER3-201ENST00000221222 SLC17A3O00476 420 aa17.46■□□□□ 0.39
HOMER3-201ENST00000221222 RBMY1DP0C7P1 496 aaKnown RBP17.46■□□□□ 0.39
HOMER3-201ENST00000221222 PDE6HQ13956 83 aa17.46■□□□□ 0.39
HOMER3-201ENST00000221222 PQLC2Q6ZP29 291 aa17.46■□□□□ 0.39
HOMER3-201ENST00000221222 C20orf173Q96LM9 149 aa17.46■□□□□ 0.39
HOMER3-201ENST00000221222 H3BTX0 84 aa17.45■□□□□ 0.38
HOMER3-201ENST00000221222 STAG3L2P0CL84 134 aa17.45■□□□□ 0.38
HOMER3-201ENST00000221222 STAG3L3P0CL85 134 aa17.45■□□□□ 0.38
HOMER3-201ENST00000221222 NKX2-5P52952 324 aaPredicted RBP17.45■□□□□ 0.38
HOMER3-201ENST00000221222 IGFL4Q6B9Z1 124 aa17.45■□□□□ 0.38
HOMER3-201ENST00000221222 B9D2Q9BPU9 175 aa17.45■□□□□ 0.38
HOMER3-201ENST00000221222 CLEC5AQ9NY25 188 aa17.45■□□□□ 0.38
HOMER3-201ENST00000221222 UMAD1C9J7I0 102 aa17.44■□□□□ 0.38
HOMER3-201ENST00000221222 EIF3GO75821 320 aaKnown RBP eCLIP17.44■□□□□ 0.38
HOMER3-201ENST00000221222 NDUFB4O95168 129 aa17.44■□□□□ 0.38
HOMER3-201ENST00000221222 OR10J4P0C629 311 aa17.44■□□□□ 0.38
HOMER3-201ENST00000221222 NBEAP1P0C6P0 100 aa17.44■□□□□ 0.38
HOMER3-201ENST00000221222 RNF182Q8N6D2 247 aa17.44■□□□□ 0.38
HOMER3-201ENST00000221222 PLA2G2EQ9NZK7 142 aa17.44■□□□□ 0.38
HOMER3-201ENST00000221222 LOC102724200A0A096LPH7 203 aaPredicted RBP17.43■□□□□ 0.38
HOMER3-201ENST00000221222 UBE2L3P68036 154 aaKnown RBP17.43■□□□□ 0.38
HOMER3-201ENST00000221222 ZNF726P1Q15940 193 aa17.43■□□□□ 0.38
HOMER3-201ENST00000221222 TMED6Q8WW62 240 aa17.43■□□□□ 0.38
HOMER3-201ENST00000221222 AGRNO00468 2067 aa17.43■□□□□ 0.38
HOMER3-201ENST00000221222 CTXND1A0A1B0GTU2 59 aa17.42■□□□□ 0.38
HOMER3-201ENST00000221222 KNCNA6PVL3 124 aa17.42■□□□□ 0.38
HOMER3-201ENST00000221222 HMGB3O15347 200 aaKnown RBP17.42■□□□□ 0.38
HOMER3-201ENST00000221222 PSG3Q16557 428 aa17.42■□□□□ 0.38
HOMER3-201ENST00000221222 ACTL10Q5JWF8 245 aa17.42■□□□□ 0.38
HOMER3-201ENST00000221222 FOXI2Q6ZQN5 318 aa17.42■□□□□ 0.38
HOMER3-201ENST00000221222 SSX7Q7RTT5 188 aa17.42■□□□□ 0.38
HOMER3-201ENST00000221222 BLNKQ8WV28 456 aa17.42■□□□□ 0.38
HOMER3-201ENST00000221222 ARL14EPLP0DKL9 152 aa17.41■□□□□ 0.38
HOMER3-201ENST00000221222 HLA-DMBP28068 263 aa17.41■□□□□ 0.38
HOMER3-201ENST00000221222 PSG9Q00887 426 aa17.41■□□□□ 0.38
HOMER3-201ENST00000221222 EIF5AL1Q6IS14 154 aaKnown RBP17.41■□□□□ 0.38
HOMER3-201ENST00000221222 STHQ8IWL8 128 aa17.41■□□□□ 0.38
HOMER3-201ENST00000221222 SAV1Q9H4B6 383 aaPredicted RBP17.41■□□□□ 0.38
HOMER3-201ENST00000221222 DNAH9Q9NYC9 4486 aa17.41■□□□□ 0.38
HOMER3-201ENST00000221222 HLA-DRB4P13762 266 aa17.4■□□□□ 0.38
HOMER3-201ENST00000221222 TRPT1Q86TN4 253 aaKnown RBP17.4■□□□□ 0.38
HOMER3-201ENST00000221222 HLA-DRB4X5D2U9 266 aa17.4■□□□□ 0.38
HOMER3-201ENST00000221222 H3BMM0 161 aa17.4■□□□□ 0.38
HOMER3-201ENST00000221222 DEFB1P60022 68 aa17.4■□□□□ 0.38
HOMER3-201ENST00000221222 GDF5OSQ5U4N7 250 aa17.4■□□□□ 0.38
HOMER3-201ENST00000221222 SBSPONQ8IVN8 264 aa17.4■□□□□ 0.38
HOMER3-201ENST00000221222 ZNF738Q8NE65 137 aa17.4■□□□□ 0.38
HOMER3-201ENST00000221222 KIR2DL5BA0A0G2JN68 375 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 KIR2DL5BA0A0G2JPC4 375 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 A0A0J9YX75 114 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 CXorf1O96002 111 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 HAGHQ16775 308 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 EBLN2Q6P2I7 272 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 DPPA3Q6W0C5 159 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 KIR2DL5AQ8N109 375 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 LYPD1Q8N2G4 141 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 KIR2DL5BQ8NHK3 375 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 SUN5Q8TC36 379 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 MRPL53Q96EL3 112 aaKnown RBP17.39■□□□□ 0.37
HOMER3-201ENST00000221222 PHYHIPLQ96FC7 376 aa17.39■□□□□ 0.37
HOMER3-201ENST00000221222 NBEAL2Q6ZNJ1 2754 aa17.38■□□□□ 0.37
HOMER3-201ENST00000221222 F6UB75 175 aa17.38■□□□□ 0.37
HOMER3-201ENST00000221222 RPL35AP18077 110 aaKnown RBP17.38■□□□□ 0.37
HOMER3-201ENST00000221222 GCHFRP30047 84 aa17.38■□□□□ 0.37
HOMER3-201ENST00000221222 FHITP49789 147 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms