RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 OR13C6PQ8NH95 151 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 TCTEX1D4Q5JR98 221 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 ATP5L2Q7Z4Y8 100 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 NUDT10Q8NFP7 164 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 NUDT11Q96G61 164 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 A8MXK9 166 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 ZNF134P52741 427 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 APOC4P55056 127 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 LRRK1Q38SD2 2015 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 PMCHL2Q9BQD1 86 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 CYTL1Q9NRR1 136 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 ADAMTS9Q9P2N4 1935 aa8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 MRPL27Q9P0M9 148 aaKnown RBP8.29□□□□□ -1.08
NIPAL3-201ENST00000003912 SRSF4Q08170 494 aaKnown RBP8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 KRTAP27-1Q3LI81 207 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 C1QL4Q86Z23 238 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 Q8NFD4 153 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 FOXL1Q12952 345 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 IGFL4Q6B9Z1 124 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 Q8TAT8 98 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 TP53BP1Q12888 1972 aaPredicted RBP8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 WNK2Q9Y3S1 2297 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 NRGNQ92686 78 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 CDX1P47902 265 aaPredicted RBP8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 TCF23Q7RTU1 214 aa8.28□□□□□ -1.08
NIPAL3-201ENST00000003912 SH2D1AO60880 128 aa8.27□□□□□ -1.08
NIPAL3-201ENST00000003912 PRB4P10163 310 aaPredicted RBP8.27□□□□□ -1.08
NIPAL3-201ENST00000003912 DIAPH2-AS1Q14236 149 aa8.27□□□□□ -1.08
NIPAL3-201ENST00000003912 LINC00469Q8N7U9 141 aa8.27□□□□□ -1.08
NIPAL3-201ENST00000003912 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.08
NIPAL3-201ENST00000003912 CD28P10747 220 aa8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 PTPRQQ9UMZ3 2332 aa8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 LYL1P12980 280 aa8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 TTC9CQ8N5M4 171 aa8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 PLXNB3Q9ULL4 1909 aa8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 TRAV8-6A0A0B4J262 113 aa8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 IGHV3-53P01767 116 aa8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 YLPM1P49750 1951 aaKnown RBP8.27□□□□□ -1.09
NIPAL3-201ENST00000003912 TPSG1Q9NRR2 321 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 CENPVL3A0A0U1RRI6 287 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 DPH3P1Q9H4G8 78 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 LY96Q9Y6Y9 160 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 A0A1B0GW64 132 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 CIDEAO60543 219 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 DEFB130BP0DP73 79 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 DEFB130AP0DP74 79 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 XCL2Q9UBD3 114 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 IGHV4-38-2P0DP08 117 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 POU2AF1Q16633 256 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 GNB1LQ9BYB4 327 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.26□□□□□ -1.095e-6■□□□□ 9.9
NIPAL3-201ENST00000003912 HBDP02042 147 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 RIPPLY3P57055 190 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 WT1-ASQ06250 92 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 SPRNQ5BIV9 151 aa8.26□□□□□ -1.09
NIPAL3-201ENST00000003912 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 CADP27708 2225 aa8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 PCP4P48539 62 aa8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 CA1P00915 261 aaPredicted RBP8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 GZMBP10144 247 aa8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 EVI2AP22794 236 aa8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 ZNF876PQ49A33 203 aa8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 RPL24P83731 157 aaKnown RBP8.25□□□□□ -1.09
NIPAL3-201ENST00000003912 DAD1P61803 113 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 COL4A3Q01955 1670 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 IGHV7-4-1A0A0J9YVY3 117 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 PSCAO43653 123 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 RNASE1P07998 156 aaKnown RBP8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 ERCC8Q13216 396 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 FOXE3Q13461 319 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 CUL9Q8IWT3 2517 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 DOPEY2Q9Y3R5 2298 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 LRRC75A-AS1Q8N1F1 130 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 JKAMPQ9P055 326 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 TRAV8-1A0A0A6YYK1 113 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 CCL24O00175 119 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 NDUFA3O95167 84 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 IGKV1-39P01597 117 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 IGKV1D-39P04432 117 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 LGALS1P09382 135 aaKnown RBP8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 Q86TA4 180 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 ATOH7Q8N100 152 aa8.24□□□□□ -1.09
NIPAL3-201ENST00000003912 LINC00614P0C842 121 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 SRSF3P84103 164 aaKnown RBP8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 Q6ZSR3 168 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 DOCK10Q96BY6 2186 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 DNAL4O96015 105 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 FAM90A2PQ658T7 463 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 RASL11AQ6T310 242 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms