RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Defa-rs12P50716 91 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 VegfcP97953 415 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Zfp111Q9R164 701 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm20939L7N243 523 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Fgf12P61329 243 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Pebp1P70296 187 aaKnown RBP14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr93Q6UAH1 312 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Plcxd2B2RXA1 340 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Cdx1P18111 268 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Fgfrl1Q91V87 529 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr1029A2ATE0 324 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 D130052B06RikQ3UW13 202 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr1028Q7TR89 324 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Fcrl1Q8R4Y0 343 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr877Q8VF62 311 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 PigpQ9JHG1 132 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Vsig10l2A0A140LHF2 776 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 TbpP29037 316 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr177E9Q7W1 309 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Flrt3Q8BGT1 649 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr981Q8VEU2 310 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 1700034E13RikQ9D2T6 108 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Neurl3Q8CJC5 254 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 P01808 119 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Acrv1P50289 261 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Dhrs11Q3U0B3 260 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Fbxo46Q8BG80 603 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Sp7Q8VI67 428 aa14.41□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 TskuQ8CBR6 354 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Mettl26Q9DCS2 204 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Dnase2bQ9QY48 354 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Nupr1Q9WTK0 80 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Shank3Q4ACU6 1730 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ascl2O35885 263 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 P01809 118 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr90Q0VEL5 310 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ifna11Q61716 190 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tmed6Q9CQG0 239 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gkn3Q9D0T7 191 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Aqp7O54794 303 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 WtipQ7TQJ8 398 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 NtmQ99PJ0 344 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ptp4a3Q9D658 173 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Prss21Q9JHJ7 324 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ssty1P13675 232 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tlnrd1Q9ERE8 362 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r27K7N688 303 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gfra3O35118 397 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 P03976 113 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Dhrs2Q149L0 282 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm9733Q1AN91 178 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Marveld3Q9D956 376 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm13199Q8C8E0 125 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Q9DAA3 117 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tnfsf14Q9QYH9 239 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Arl14eplQ3UKZ7 152 aa14.4□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr905L7N1X5 310 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Cd200r4Q6XJV4 270 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Nxph1Q61200 271 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ifi27Q8C6G0 260 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Prodh2Q8VCZ9 456 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Fcgr4A0A0B4J1G0 249 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Igkv1-132A0A0B4J1H9 120 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Sfrp2P97299 295 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Q3TEI4 1023 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Znf503Q7TMA2 652 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ndufs8Q8K3J1 212 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Q9DAZ5 108 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1185-ps1F6XP16 303 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Defa3P28310 93 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Defa10P50708 93 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Defa15P50713 93 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1178Q7TR20 323 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr435Q8VFS3 313 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Arrdc2Q9D668 407 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Q6DIA7 600 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr965Q7TRA7 312 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr553Q7TRS6 326 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 CcsQ9WU84 274 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1104A2AVB5 310 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ep300B2RWS6 2412 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ighv1-42A0A0A6YY38 117 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Psg18B2RSG7 476 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 GlulP15105 373 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Masp2Q91WP0 685 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ncoa6Q9JL19 2067 aa14.39□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm38303A0A0A6YWW8 100 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm21719J3KMI9 230 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Pef1Q8BFY6 275 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm45736A0A1B0GS18 427 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Mrpl23O35972 146 aaKnown RBP14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Pnliprp2P17892 482 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Nrn1lQ8C4W3 162 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gpa33Q9JKA5 319 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Cyb561d1A2AE42 229 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 P01648 108 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tmem170bP86050 132 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Foxc2Q61850 494 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Glipr1Q9CWG1 255 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr94Q6UAH0 386 aa14.38□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms