RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 B3gnt9Q8VI16 399 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 H2afb1Q9CQ70 111 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Onecut1O08755 465 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Fgf8P37237 268 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Shisa6Q3UH99 525 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr141Q60880 325 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Q6PIU9 354 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 C730034F03RikQ8BGL5 111 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr960Q8VET5 316 aa7.15□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cpsf4lE9Q2N0 280 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Tnfaip6O08859 275 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Syngr2O55101 224 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr94Q6UAH0 386 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 EpopQ7TNS8 369 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Tmem128Q9CZB9 163 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Scgb1b12A0A087WP21 93 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Igkv6-15A0A140T8M5 115 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Rtl4Q3URY0 304 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Gm6899Q3USS0 134 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Trav8d-1Q5R1H8 112 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr484Q8VFD3 321 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 GgactQ923B0 149 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Sft2d3Q9CSV6 209 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cox20Q9D7J4 117 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Col4a2P08122 1707 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Trav4-2A0A075B638 110 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Wfdc11A2A5H7 82 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Zfp980A2A9J5 645 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cldn1O88551 211 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 RhobP62746 196 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 ClcP97400 68 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Psg17Q62056 475 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 9030612E09RikQ8CE20 140 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Exosc2Q8VBV3 293 aaKnown RBP7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr354Q8VGJ8 317 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 FibinQ9CQS3 217 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Prss30Q9QYZ9 310 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 AU041133A0A0J9YVH3 498 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr1289A0A288CFY5 326 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Trav12d-1A0N8R0 115 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 P04946 108 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Ceacam12Q3UKP4 300 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Slc25a31Q3V132 320 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr963Q7TRA9 311 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Lrtm1Q8BXQ3 356 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Fam174bQ8K064 153 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 AamdcQ8R0P4 122 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Sfxn4Q925N1 313 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Hdhd3Q9CYW4 251 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Tctex1d1Q9D5I4 173 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr1179A2AUS6 307 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Sumo1P63166 101 aaKnown RBP7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Lhfpl4Q5U4E0 247 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Lrfn3Q8BLY3 626 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Crispld2Q8BZQ2 495 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 RfxapQ8VCG9 231 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cma2Q91VB1 246 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Ms4a6dQ99N07 247 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Mrpl51Q9CPY1 128 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cmtm2bQ9DAC0 210 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Hsd17b6Q9R092 317 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Ints1Q6P4S8 2195 aa7.14□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Trav6-1A0A075B5Z8 112 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Gm28171A0A087WQ19 227 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 1700084M14RikB1AT01 78 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Ccl3P10855 92 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Id4P41139 161 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr1362Q5SZZ8 308 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr132Q7TRI8 313 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 C130073F10RikQ8C4L8 201 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr470Q8VF65 314 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr1457Q8VFK3 317 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr641Q8VGX6 312 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Defb6Q91VD6 63 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Vmn1r54Q9EPB8 315 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Sdk2Q6V4S5 2176 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Gm5218F6YH22 154 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Srp14P16254 110 aaKnown RBP7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Q0VG62 139 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Gm14851Q5ERJ0 116 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Sap30lQ5SQF8 182 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Fbxw26Q8BI58 466 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Vmn1r202Q8R259 302 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Anapc16Q9CPV2 110 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 RetnlaQ9EP95 111 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cml1Q9JIZ0 222 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr1465Q7TQR2 307 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr875Q7TRE5 310 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cdcp2Q8BQH6 427 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr654Q8VF27 341 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr1155Q8VFR3 314 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Rnf2Q9CQJ4 336 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Sgms2Q9D4B1 365 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Cabin1G3X8Q1 2187 aaKnown RBP7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr747E9PXH6 313 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 Olfr1220F7BL62 311 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 P01796 113 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 P01797 113 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 P01799 113 aa7.13□□□□□ -1.27
Sf3b1-201ENSMUST00000027127 FmodP50608 376 aa7.13□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms