RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 RAXQ9Y2V3 346 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 CHD8Q9HCK8 2581 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 FAM90A27PA6NNH2 459 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 J3QR06 171 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 IGKV3-15P01624 115 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 MPV17P39210 176 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 TBC1D28Q2M2D7 210 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 PTH2Q96A98 100 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 MS4A6AQ9H2W1 248 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 NAV3Q8IVL0 2385 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 SMAD7O15105 426 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 MT-ATP8P03928 68 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 TEX29Q8N6K0 151 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 DEFB104AQ8WTQ1 72 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 MPC1Q9Y5U8 109 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 TLN1Q9Y490 2541 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 CYSLTR1Q9Y271 337 aa9.6□□□□□ -0.87
RBFOX1-224ENST00000641259 CFHR2P36980 270 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 VDAC2P45880 294 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 REG1BP48304 166 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 TMPRSS3P57727 454 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 C10orf113Q5VZT2 155 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 CIARTQ8N365 385 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 NPIPB3Q92617 1050 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 PROCRQ9UNN8 238 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 CECR9P0C854 216 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 AREGP15514 252 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 PSPNO60542 156 aa9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 SOX21Q9Y651 276 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-224ENST00000641259 IGHV3OR15-7A0A075B7D8 119 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 IGHV1-18A0A0C4DH31 117 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM106CPP0CH98 169 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM106AQ4KMX7 169 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 GOLT1AQ6ZVE7 132 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 ENSAO43768 121 aaKnown RBP9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 IDI2-AS1Q9NZ38 188 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 DKK2Q9UBU2 259 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 AGRNO00468 2067 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 PRSS29PA6NIE9 313 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 LTAP01374 205 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 MSMPQ1L6U9 139 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 MORN5Q5VZ52 161 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 OR13A1Q8NGR1 328 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM57AQ8TBR7 257 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 HES4Q9HCC6 221 aa9.58□□□□□ -0.88
RBFOX1-224ENST00000641259 HCFC1P51610 2035 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 RAB1CQ92928 201 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 DCHS2Q6V1P9 2916 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 PMS2P5A8MQ11 134 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 TIMM8AO60220 97 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 CKS2P33552 79 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 C1orf162Q8NEQ5 155 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 KLF14Q8TD94 323 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 FOXC2Q99958 501 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 LRBAP50851 2863 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 J3QT63 122 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 IGLV1-44P01699 117 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 HCP5Q6MZN7 132 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 BEX4Q9NWD9 120 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 SLC25A15Q9Y619 301 aa9.57□□□□□ -0.88
RBFOX1-224ENST00000641259 SIVA1O15304 175 aa9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 CT45A10P0DMU9 189 aa9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 CHAC1Q9BUX1 264 aa9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 NDUFA3O95167 84 aa9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 IGLV2-14P01704 120 aa9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 LOXL1Q08397 574 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 OR4X2Q8NGF9 303 aa9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 OSR1Q8TAX0 266 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 CHCHD1Q96BP2 118 aaKnown RBP9.56□□□□□ -0.88
RBFOX1-224ENST00000641259 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 D6R8Y8 96 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 ARMS2P0C7Q2 107 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 SMIM17P0DL12 118 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 EVI2AP22794 236 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM27E3Q08E93 113 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 Q1RN00 199 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 OR5AN1Q8NGI8 311 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 NCOR2Q9Y618 2525 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 A0A0G2JNJ9 132 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 LYZP61626 148 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 ZFAND6Q6FIF0 208 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 UFSP1Q6NVU6 142 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 LINC00305Q7Z4B0 112 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 Q9UFV3 132 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 OOEPA6NGQ2 149 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 NPIPB5A8MRT5 1133 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 TNFRSF1AP19438 455 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 RBPMS2Q6ZRY4 209 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 C8orf86Q6ZUL3 223 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 PRELID3AQ96N28 172 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 ATRXP46100 2492 aa9.55□□□□□ -0.88
RBFOX1-224ENST00000641259 RIGQ13278 110 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms