RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 C10orf55Q5SWW7 151 aa9.59□□□□□ -0.87
PAX6-245ENST00000638914 SPATA31B1PQ5VZV4 182 aa9.59□□□□□ -0.87
PAX6-245ENST00000638914 FNDC10F2Z333 226 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 TRAV12-3A0A0B4J271 114 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 HBDP02042 147 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 IGKV1-12A0A0C4DH73 117 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 IGKV1D-12P01611 117 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 ATP5G3P48201 142 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 THSD7BQ9C0I4 1608 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 IGKV1D-17A0A075B6S4 117 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 ERCC8Q13216 396 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 COQ2Q96H96 371 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 TCF15Q12870 199 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 ATP5L2Q7Z4Y8 100 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 RASL10AQ92737 203 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 TECTAO75443 2155 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 IGKV3D-20A0A0C4DH25 116 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 PYYP10082 97 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 LYPD2Q6UXB3 125 aa9.58□□□□□ -0.88
PAX6-245ENST00000638914 TSSC4Q9Y5U2 329 aaPredicted RBP9.57□□□□□ -0.88
PAX6-245ENST00000638914 MAPK1IP1LQ8NDC0 245 aa9.57□□□□□ -0.88
PAX6-245ENST00000638914 TMEM158Q8WZ71 300 aa9.57□□□□□ -0.88
PAX6-245ENST00000638914 DMRTC2Q8IXT2 367 aaPredicted RBP9.57□□□□□ -0.88
PAX6-245ENST00000638914 PSG3Q16557 428 aa9.57□□□□□ -0.88
PAX6-245ENST00000638914 RASL11AQ6T310 242 aa9.57□□□□□ -0.88
PAX6-245ENST00000638914 Q71RC1 249 aaPredicted RBP9.57□□□□□ -0.88
PAX6-245ENST00000638914 HEATR5AQ86XA9 2040 aa9.57□□□□□ -0.88
PAX6-245ENST00000638914 TFF1P04155 84 aa9.57□□□□□ -0.88
PAX6-245ENST00000638914 PUSL1Q8N0Z8 303 aaKnown RBP9.57□□□□□ -0.88
PAX6-245ENST00000638914 SLC17A3O00476 420 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 FOXL2NBQ6ZUU3 175 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 DPM2O94777 84 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 C1orf122Q6ZSJ8 110 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 DYSFO75923 2080 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 GGTLC3B5MD39 225 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 C1orf194Q5T5A4 169 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 TEX43Q6ZNM6 134 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 CD55P08174 381 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 GNG5P63218 68 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 GGTLC1Q9BX51 225 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 SMPXQ9UHP9 88 aa9.56□□□□□ -0.88
PAX6-245ENST00000638914 KLF17Q5JT82 389 aaPredicted RBP9.55□□□□□ -0.88
PAX6-245ENST00000638914 Q6ZS49 121 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 SLX1AQ9BQ83 275 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 MRPL27Q9P0M9 148 aaKnown RBP9.55□□□□□ -0.88
PAX6-245ENST00000638914 TTC32Q5I0X7 151 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 TSKUQ8WUA8 353 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 NDUFA3O95167 84 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 LMO1P25800 156 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 SRP19P09132 144 aaKnown RBP9.55□□□□□ -0.88
PAX6-245ENST00000638914 DMRTA1Q5VZB9 504 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 IL17RELQ6ZVW7 336 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 SCRT1Q9BWW7 348 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 TEX48A0A1B0GUV7 120 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 NDPQ00604 133 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 TCTEX1D4Q5JR98 221 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 Q6P435 159 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 PLEKHB2Q96CS7 222 aa9.55□□□□□ -0.88
PAX6-245ENST00000638914 A0A087WWC5 75 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 PLA2G5P39877 138 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 RUSC1-AS1Q66K80 236 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 VPREB3Q9UKI3 123 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 IFITM2Q01629 132 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 OR2K2Q8NGT1 345 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 DLX4Q92988 240 aaPredicted RBP9.54□□□□□ -0.88
PAX6-245ENST00000638914 H3BUA1 57 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 SRSF4Q08170 494 aaKnown RBP9.54□□□□□ -0.88
PAX6-245ENST00000638914 CHD3Q12873 2000 aaKnown RBP9.54□□□□□ -0.88
PAX6-245ENST00000638914 PAX4O43316 350 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 IGHV3-53P01767 116 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 CGB3P0DN86 165 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 PPIFP30405 207 aaKnown RBP9.54□□□□□ -0.88
PAX6-245ENST00000638914 C9orf66Q5T8R8 295 aa9.54□□□□□ -0.88
PAX6-245ENST00000638914 NDUFA4O00483 81 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 ATP6V0E1O15342 81 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
PAX6-245ENST00000638914 YPEL3P61236 119 aaPredicted RBP9.53□□□□□ -0.88
PAX6-245ENST00000638914 C1orf159Q96HA4 380 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 TMEM238C9JI98 176 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 CGB7P0DN87 165 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 IFITM3Q01628 133 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 LAGE3Q14657 143 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 IGKV2-40A0A087WW87 121 aaPredicted RBP9.53□□□□□ -0.88
PAX6-245ENST00000638914 IGKV2D-40P01614 121 aaPredicted RBP9.53□□□□□ -0.88
PAX6-245ENST00000638914 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 CLPSP04118 112 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 RIPPLY3P57055 190 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 EFNB1P98172 346 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 NMSQ5H8A3 153 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 PNRC2Q9NPJ4 139 aaKnown RBP9.53□□□□□ -0.88
PAX6-245ENST00000638914 LINC00311Q8N616 119 aa9.53□□□□□ -0.88
PAX6-245ENST00000638914 SHISA3A0PJX4 238 aa9.52□□□□□ -0.88
PAX6-245ENST00000638914 A8MWV9 139 aa9.52□□□□□ -0.88
PAX6-245ENST00000638914 KAAG1Q9UBP8 84 aa9.52□□□□□ -0.88
PAX6-245ENST00000638914 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
PAX6-245ENST00000638914 TSPAN13O95857 204 aa9.52□□□□□ -0.89
PAX6-245ENST00000638914 LINC00614P0C842 121 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms