RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CHAC1Q9BUX1 264 aa15.08■□□□□ 0
SCARB2-213ENST00000638680 DPH3P1Q9H4G8 78 aa15.08■□□□□ 0
SCARB2-213ENST00000638680 AHCTF1Q8WYP5 2266 aa15.08■□□□□ 0
SCARB2-213ENST00000638680 IGKV1D-17A0A075B6S4 117 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 TRAV40A0A0B4J280 105 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 RNASE2P10153 161 aaKnown RBP15.07■□□□□ 0
SCARB2-213ENST00000638680 ZNF672Q499Z4 452 aaPredicted RBP15.07■□□□□ 0
SCARB2-213ENST00000638680 Q86TA4 180 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 PLEKHB2Q96CS7 222 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 TMEM249Q2WGJ8 235 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 TMEM219Q86XT9 240 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 ASCL4Q6XD76 172 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 LURAP1LQ8IV03 231 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 CSTL1Q9H114 145 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 GHRHP01286 108 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 OCIAD2Q56VL3 154 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 CHCHD5Q9BSY4 110 aa15.07■□□□□ 0
SCARB2-213ENST00000638680 C14orf178Q8N769 122 aaPredicted RBP15.06■□□□□ 0
SCARB2-213ENST00000638680 HS3ST6Q96QI5 342 aa15.06■□□□□ 0
SCARB2-213ENST00000638680 CFPP27918 469 aa15.06■□□□□ 0
SCARB2-213ENST00000638680 STPG4Q8N801 248 aa15.06■□□□□ 0
SCARB2-213ENST00000638680 SRRM4A7MD48 611 aaKnown RBP15.05■□□□□ 0
SCARB2-213ENST00000638680 PFN1P07737 140 aaKnown RBP15.05■□□□□ 0
SCARB2-213ENST00000638680 C2orf82Q6UX34 121 aa15.05■□□□□ 0
SCARB2-213ENST00000638680 ADAMTSL5Q6ZMM2 481 aa15.05■□□□□ 0
SCARB2-213ENST00000638680 C1orf122Q6ZSJ8 110 aa15.05■□□□□ 0
SCARB2-213ENST00000638680 C17orf82Q86X59 251 aaPredicted RBP15.05■□□□□ 0
SCARB2-213ENST00000638680 RCHY1Q96PM5 261 aa15.05■□□□□ 0
SCARB2-213ENST00000638680 TMEM86BQ8N661 226 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 GATD1Q8NB37 220 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 SNHG12Q9BXW3 62 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 ABCA7Q8IZY2 2146 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 B3GALT5-AS1P59052 145 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 SSBP2P81877 361 aaPredicted RBP15.05■□□□□ -0
SCARB2-213ENST00000638680 FOXL2NBQ6ZUU3 175 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 RNF5Q99942 180 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 ESPL1Q14674 2120 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 IGKV1-6A0A0C4DH72 117 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 C20orf144Q9BQM9 153 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 GFRA4Q9GZZ7 299 aa15.05■□□□□ -0
SCARB2-213ENST00000638680 ARHGEF17Q96PE2 2063 aaPredicted RBP15.05■□□□□ -0
SCARB2-213ENST00000638680 TEX43Q6ZNM6 134 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 LYPD1Q8N2G4 141 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 SIGLEC9Q9Y336 463 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 VCYO14598 125 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 BUB1B-PAK6H3BSN5 160 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 LCNL1Q6ZST4 164 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 ANK1P16157 1881 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 IGKV1-16P04430 117 aa15.04■□□□□ -0
SCARB2-213ENST00000638680 CRPP02741 224 aa15.03■□□□□ -0
SCARB2-213ENST00000638680 ARMS2P0C7Q2 107 aa15.03■□□□□ -0
SCARB2-213ENST00000638680 FNDC10F2Z333 226 aa15.03■□□□□ -0
SCARB2-213ENST00000638680 C5orf64Q2M2E5 130 aa15.03■□□□□ -0
SCARB2-213ENST00000638680 PHLDA1Q8WV24 401 aaPredicted RBP15.03■□□□□ -0
SCARB2-213ENST00000638680 TNFRSF6BO95407 300 aa15.03■□□□□ -0
SCARB2-213ENST00000638680 C18orf32Q8TCD1 76 aa15.03■□□□□ -0
SCARB2-213ENST00000638680 HIST1H4AP62805 103 aaKnown RBP15.02■□□□□ -0
SCARB2-213ENST00000638680 ERCC8Q13216 396 aa15.02■□□□□ -0
SCARB2-213ENST00000638680 S100A7L2Q5SY68 101 aa15.02■□□□□ -0
SCARB2-213ENST00000638680 C9orf139Q6ZV77 190 aa15.02■□□□□ -0
SCARB2-213ENST00000638680 CYYR1Q96J86 154 aa15.02■□□□□ -0
SCARB2-213ENST00000638680 IGHV2-70P01814 119 aa15.02□□□□□ -0.01
SCARB2-213ENST00000638680 C3orf36Q3SXR2 165 aa15.02□□□□□ -0.01
SCARB2-213ENST00000638680 DOCK6Q96HP0 2047 aa15.02□□□□□ -0.01
SCARB2-213ENST00000638680 XIRP1Q702N8 1843 aaKnown RBP15.02□□□□□ -0.01
SCARB2-213ENST00000638680 LIME1Q9H400 295 aa15.02□□□□□ -0.01
SCARB2-213ENST00000638680 LINC00477Q96M19 166 aa15.02□□□□□ -0.01
SCARB2-213ENST00000638680 FAM231BA6NCW3 169 aa15.01□□□□□ -0.01
SCARB2-213ENST00000638680 SDK2Q58EX2 2172 aa15.01□□□□□ -0.01
SCARB2-213ENST00000638680 ZNF688P0C7X2 276 aa15.01□□□□□ -0.01
SCARB2-213ENST00000638680 ZNF726P1Q15940 193 aa15.01□□□□□ -0.01
SCARB2-213ENST00000638680 CEP290O15078 2479 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 TRBV7-1A0A0A6YYK4 115 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 FCN3O75636 299 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 SPINK8P0C7L1 97 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 C11orf44Q8N8P7 122 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 PAX9P55771 341 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 C10orf91Q5T1B1 145 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 PAX4O43316 350 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 LGALS1P09382 135 aaKnown RBP15□□□□□ -0.01
SCARB2-213ENST00000638680 APC2O95996 2303 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 ZNF318Q5VUA4 2279 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 TRAV8-3A0A0A6YYJ7 113 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 TMEM213A2RRL7 107 aa15□□□□□ -0.01
SCARB2-213ENST00000638680 ANAPC10Q9UM13 185 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 MINOS1Q5TGZ0 78 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 LYPD2Q6UXB3 125 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 MINOS1-NBL1R4GNA1 71 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 A0A087WWL8 130 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 CD59P13987 128 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 SHANK2-AS3Q9BTD1 123 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 CFHR2P36980 270 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 Q6ZWC4 215 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 CST9LQ9H4G1 147 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 CACNA1DQ01668 2161 aa14.99□□□□□ -0.01
SCARB2-213ENST00000638680 RASL10AQ92737 203 aa14.98□□□□□ -0.01
SCARB2-213ENST00000638680 ZNRD1Q9P1U0 126 aa14.98□□□□□ -0.01
SCARB2-213ENST00000638680 RTTNQ86VV8 2226 aa14.98□□□□□ -0.01
SCARB2-213ENST00000638680 ZNF562Q6V9R5 426 aa14.98□□□□□ -0.01
SCARB2-213ENST00000638680 MDS2Q8NDY4 140 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms